Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smco1Q8CEZ1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smco1Q8CEZ1 Gm30023-201ENSMUST00000197970 889 ntBASIC20.41■□□□□ 0.86
Smco1Q8CEZ1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smco1Q8CEZ1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.4■□□□□ 0.86
Smco1Q8CEZ1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smco1Q8CEZ1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smco1Q8CEZ1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smco1Q8CEZ1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smco1Q8CEZ1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smco1Q8CEZ1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Smco1Q8CEZ1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Smco1Q8CEZ1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco1Q8CEZ1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smco1Q8CEZ1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smco1Q8CEZ1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smco1Q8CEZ1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smco1Q8CEZ1 Gm8109-201ENSMUST00000194076 746 ntBASIC20.36■□□□□ 0.85
Smco1Q8CEZ1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smco1Q8CEZ1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Smco1Q8CEZ1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smco1Q8CEZ1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smco1Q8CEZ1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smco1Q8CEZ1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smco1Q8CEZ1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.34■□□□□ 0.85
Smco1Q8CEZ1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smco1Q8CEZ1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smco1Q8CEZ1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smco1Q8CEZ1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smco1Q8CEZ1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smco1Q8CEZ1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smco1Q8CEZ1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smco1Q8CEZ1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Smco1Q8CEZ1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smco1Q8CEZ1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.33■□□□□ 0.85
Smco1Q8CEZ1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smco1Q8CEZ1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Smco1Q8CEZ1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smco1Q8CEZ1 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.32■□□□□ 0.84
Smco1Q8CEZ1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smco1Q8CEZ1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Smco1Q8CEZ1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smco1Q8CEZ1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smco1Q8CEZ1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smco1Q8CEZ1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Smco1Q8CEZ1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Smco1Q8CEZ1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smco1Q8CEZ1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smco1Q8CEZ1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Smco1Q8CEZ1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Smco1Q8CEZ1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smco1Q8CEZ1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smco1Q8CEZ1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smco1Q8CEZ1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smco1Q8CEZ1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smco1Q8CEZ1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smco1Q8CEZ1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smco1Q8CEZ1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smco1Q8CEZ1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Smco1Q8CEZ1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smco1Q8CEZ1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smco1Q8CEZ1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smco1Q8CEZ1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Smco1Q8CEZ1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smco1Q8CEZ1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smco1Q8CEZ1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smco1Q8CEZ1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smco1Q8CEZ1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smco1Q8CEZ1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smco1Q8CEZ1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smco1Q8CEZ1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smco1Q8CEZ1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.24■□□□□ 0.83
Smco1Q8CEZ1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smco1Q8CEZ1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smco1Q8CEZ1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smco1Q8CEZ1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.23■□□□□ 0.83
Smco1Q8CEZ1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.23■□□□□ 0.83
Smco1Q8CEZ1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smco1Q8CEZ1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms