Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Trim9Q8C7M3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
Trim9Q8C7M3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim9Q8C7M3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.74■■□□□ 1.55
Trim9Q8C7M3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trim9Q8C7M3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim9Q8C7M3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Trim9Q8C7M3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Trim9Q8C7M3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Trim9Q8C7M3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim9Q8C7M3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim9Q8C7M3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim9Q8C7M3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim9Q8C7M3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim9Q8C7M3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim9Q8C7M3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Trim9Q8C7M3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim9Q8C7M3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim9Q8C7M3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim9Q8C7M3 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.7■■□□□ 1.54
Trim9Q8C7M3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.69■■□□□ 1.54
Trim9Q8C7M3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim9Q8C7M3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim9Q8C7M3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
Trim9Q8C7M3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Trim9Q8C7M3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim9Q8C7M3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Trim9Q8C7M3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Trim9Q8C7M3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Trim9Q8C7M3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim9Q8C7M3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.67■■□□□ 1.54
Trim9Q8C7M3 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.67■■□□□ 1.54
Trim9Q8C7M3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim9Q8C7M3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.67■■□□□ 1.54
Trim9Q8C7M3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.67■■□□□ 1.54
Trim9Q8C7M3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim9Q8C7M3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Trim9Q8C7M3 Scarna2-201ENSMUST00000157560 414 ntBASIC24.66■■□□□ 1.54
Trim9Q8C7M3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim9Q8C7M3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.65■■□□□ 1.54
Trim9Q8C7M3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim9Q8C7M3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.65■■□□□ 1.54
Trim9Q8C7M3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim9Q8C7M3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Trim9Q8C7M3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim9Q8C7M3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Trim9Q8C7M3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
Trim9Q8C7M3 Gm9806-201ENSMUST00000051080 552 ntBASIC24.64■■□□□ 1.54
Trim9Q8C7M3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Trim9Q8C7M3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim9Q8C7M3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim9Q8C7M3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim9Q8C7M3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim9Q8C7M3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Trim9Q8C7M3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim9Q8C7M3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim9Q8C7M3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim9Q8C7M3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim9Q8C7M3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Trim9Q8C7M3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim9Q8C7M3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.62■■□□□ 1.53
Trim9Q8C7M3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Trim9Q8C7M3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim9Q8C7M3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim9Q8C7M3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Trim9Q8C7M3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim9Q8C7M3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.61■■□□□ 1.53
Trim9Q8C7M3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.61■■□□□ 1.53
Trim9Q8C7M3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim9Q8C7M3 Gm16437-201ENSMUST00000025669 507 ntBASIC24.6■■□□□ 1.53
Trim9Q8C7M3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim9Q8C7M3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Trim9Q8C7M3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim9Q8C7M3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim9Q8C7M3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Trim9Q8C7M3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim9Q8C7M3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim9Q8C7M3 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.58■■□□□ 1.53
Trim9Q8C7M3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.58■■□□□ 1.53
Trim9Q8C7M3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim9Q8C7M3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim9Q8C7M3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.57■■□□□ 1.52
Trim9Q8C7M3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim9Q8C7M3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Trim9Q8C7M3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim9Q8C7M3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.56■■□□□ 1.52
Trim9Q8C7M3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim9Q8C7M3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim9Q8C7M3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim9Q8C7M3 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.54■■□□□ 1.52
Trim9Q8C7M3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trim9Q8C7M3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Trim9Q8C7M3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Trim9Q8C7M3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trim9Q8C7M3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim9Q8C7M3 Gm44428-201ENSMUST00000204474 874 ntBASIC24.53■■□□□ 1.52
Trim9Q8C7M3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim9Q8C7M3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Trim9Q8C7M3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.52■■□□□ 1.52
Trim9Q8C7M3 Gm11687-201ENSMUST00000118911 886 ntBASIC24.52■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 1091.5 ms