Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.93■■□□□ 1.1
Cfap54Q8C6S9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.93■■□□□ 1.1
Cfap54Q8C6S9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cfap54Q8C6S9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cfap54Q8C6S9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cfap54Q8C6S9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cfap54Q8C6S9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cfap54Q8C6S9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cfap54Q8C6S9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cfap54Q8C6S9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.92■■□□□ 1.1
Cfap54Q8C6S9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cfap54Q8C6S9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.92■■□□□ 1.1
Cfap54Q8C6S9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cfap54Q8C6S9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cfap54Q8C6S9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 Gm21956-201ENSMUST00000179946 522 ntBASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cfap54Q8C6S9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cfap54Q8C6S9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.9■■□□□ 1.1
Cfap54Q8C6S9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cfap54Q8C6S9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cfap54Q8C6S9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.89■■□□□ 1.1
Cfap54Q8C6S9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Cfap54Q8C6S9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cfap54Q8C6S9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.89■■□□□ 1.09
Cfap54Q8C6S9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cfap54Q8C6S9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cfap54Q8C6S9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cfap54Q8C6S9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cfap54Q8C6S9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.87■■□□□ 1.09
Cfap54Q8C6S9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cfap54Q8C6S9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cfap54Q8C6S9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.86■■□□□ 1.09
Cfap54Q8C6S9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cfap54Q8C6S9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cfap54Q8C6S9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cfap54Q8C6S9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.85■■□□□ 1.09
Cfap54Q8C6S9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Cfap54Q8C6S9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cfap54Q8C6S9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Cfap54Q8C6S9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cfap54Q8C6S9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cfap54Q8C6S9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cfap54Q8C6S9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cfap54Q8C6S9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Cfap54Q8C6S9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Cfap54Q8C6S9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Cfap54Q8C6S9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cfap54Q8C6S9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cfap54Q8C6S9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cfap54Q8C6S9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.82■■□□□ 1.08
Cfap54Q8C6S9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap54Q8C6S9 Gm10232-201ENSMUST00000089221 720 ntBASIC21.81■■□□□ 1.08
Cfap54Q8C6S9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap54Q8C6S9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cfap54Q8C6S9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap54Q8C6S9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap54Q8C6S9 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.8■■□□□ 1.08
Cfap54Q8C6S9 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.8■■□□□ 1.08
Cfap54Q8C6S9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap54Q8C6S9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap54Q8C6S9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cfap54Q8C6S9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.8■■□□□ 1.08
Cfap54Q8C6S9 Gm13241-201ENSMUST00000094493 780 ntBASIC21.79■■□□□ 1.08
Cfap54Q8C6S9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cfap54Q8C6S9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
Cfap54Q8C6S9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap54Q8C6S9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap54Q8C6S9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap54Q8C6S9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cfap54Q8C6S9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap54Q8C6S9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cfap54Q8C6S9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Cfap54Q8C6S9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cfap54Q8C6S9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.76■■□□□ 1.07
Cfap54Q8C6S9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.76■■□□□ 1.07
Cfap54Q8C6S9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap54Q8C6S9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap54Q8C6S9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap54Q8C6S9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.76■■□□□ 1.07
Cfap54Q8C6S9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap54Q8C6S9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cfap54Q8C6S9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cfap54Q8C6S9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms