Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.67■■□□□ 1.22
Ccdc187Q8C5V8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc187Q8C5V8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc187Q8C5V8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc187Q8C5V8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc187Q8C5V8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc187Q8C5V8 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.65■■□□□ 1.22
Ccdc187Q8C5V8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Ccdc187Q8C5V8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.64■■□□□ 1.21
Ccdc187Q8C5V8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc187Q8C5V8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.63■■□□□ 1.21
Ccdc187Q8C5V8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ccdc187Q8C5V8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Ccdc187Q8C5V8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc187Q8C5V8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.62■■□□□ 1.21
Ccdc187Q8C5V8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc187Q8C5V8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc187Q8C5V8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ccdc187Q8C5V8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ccdc187Q8C5V8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ccdc187Q8C5V8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc187Q8C5V8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc187Q8C5V8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ccdc187Q8C5V8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.6■■□□□ 1.21
Ccdc187Q8C5V8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc187Q8C5V8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Ccdc187Q8C5V8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Ccdc187Q8C5V8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ccdc187Q8C5V8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ccdc187Q8C5V8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.59■■□□□ 1.21
Ccdc187Q8C5V8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc187Q8C5V8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Ccdc187Q8C5V8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Ccdc187Q8C5V8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Ccdc187Q8C5V8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc187Q8C5V8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc187Q8C5V8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc187Q8C5V8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc187Q8C5V8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc187Q8C5V8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc187Q8C5V8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 Gm22567-201ENSMUST00000175542 342 ntBASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc187Q8C5V8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc187Q8C5V8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc187Q8C5V8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.56■■□□□ 1.2
Ccdc187Q8C5V8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc187Q8C5V8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc187Q8C5V8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ccdc187Q8C5V8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc187Q8C5V8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.55■■□□□ 1.2
Ccdc187Q8C5V8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.55■■□□□ 1.2
Ccdc187Q8C5V8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ccdc187Q8C5V8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ccdc187Q8C5V8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc187Q8C5V8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc187Q8C5V8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc187Q8C5V8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc187Q8C5V8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc187Q8C5V8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ccdc187Q8C5V8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc187Q8C5V8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.53■■□□□ 1.2
Ccdc187Q8C5V8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc187Q8C5V8 Gm15820-201ENSMUST00000201566 728 ntBASIC22.52■■□□□ 1.2
Ccdc187Q8C5V8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.52■■□□□ 1.2
Ccdc187Q8C5V8 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.52■■□□□ 1.2
Ccdc187Q8C5V8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc187Q8C5V8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc187Q8C5V8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc187Q8C5V8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc187Q8C5V8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc187Q8C5V8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.51■■□□□ 1.19
Ccdc187Q8C5V8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.51■■□□□ 1.19
Ccdc187Q8C5V8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc187Q8C5V8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ccdc187Q8C5V8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ccdc187Q8C5V8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.49■■□□□ 1.19
Ccdc187Q8C5V8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ccdc187Q8C5V8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ccdc187Q8C5V8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc187Q8C5V8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc187Q8C5V8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ccdc187Q8C5V8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Ccdc187Q8C5V8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc187Q8C5V8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Ccdc187Q8C5V8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ccdc187Q8C5V8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Ccdc187Q8C5V8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc187Q8C5V8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc187Q8C5V8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc187Q8C5V8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Ccdc187Q8C5V8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.46■■□□□ 1.19
Ccdc187Q8C5V8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ccdc187Q8C5V8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms