Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ppp4r4Q8C0Y0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ppp4r4Q8C0Y0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ppp4r4Q8C0Y0 Mir6538-201ENSMUST00000183713 110 ntBASIC22.33■■□□□ 1.17
Ppp4r4Q8C0Y0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.33■■□□□ 1.17
Ppp4r4Q8C0Y0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.33■■□□□ 1.17
Ppp4r4Q8C0Y0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ppp4r4Q8C0Y0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ppp4r4Q8C0Y0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ppp4r4Q8C0Y0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ppp4r4Q8C0Y0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ppp4r4Q8C0Y0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Ppp4r4Q8C0Y0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ppp4r4Q8C0Y0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Ppp4r4Q8C0Y0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ppp4r4Q8C0Y0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.31■■□□□ 1.16
Ppp4r4Q8C0Y0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ppp4r4Q8C0Y0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ppp4r4Q8C0Y0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Ppp4r4Q8C0Y0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.29■■□□□ 1.16
Ppp4r4Q8C0Y0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ppp4r4Q8C0Y0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ppp4r4Q8C0Y0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Ppp4r4Q8C0Y0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ppp4r4Q8C0Y0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ppp4r4Q8C0Y0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ppp4r4Q8C0Y0 Gm27502-201ENSMUST00000183495 199 ntBASIC22.28■■□□□ 1.16
Ppp4r4Q8C0Y0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ppp4r4Q8C0Y0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ppp4r4Q8C0Y0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Ppp4r4Q8C0Y0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ppp4r4Q8C0Y0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ppp4r4Q8C0Y0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.27■■□□□ 1.16
Ppp4r4Q8C0Y0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ppp4r4Q8C0Y0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ppp4r4Q8C0Y0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Ppp4r4Q8C0Y0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.25■■□□□ 1.15
Ppp4r4Q8C0Y0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ppp4r4Q8C0Y0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ppp4r4Q8C0Y0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Ppp4r4Q8C0Y0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ppp4r4Q8C0Y0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ppp4r4Q8C0Y0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ppp4r4Q8C0Y0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ppp4r4Q8C0Y0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.24■■□□□ 1.15
Ppp4r4Q8C0Y0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Ppp4r4Q8C0Y0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ppp4r4Q8C0Y0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ppp4r4Q8C0Y0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ppp4r4Q8C0Y0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ppp4r4Q8C0Y0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Ppp4r4Q8C0Y0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Ppp4r4Q8C0Y0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ppp4r4Q8C0Y0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ppp4r4Q8C0Y0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ppp4r4Q8C0Y0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ppp4r4Q8C0Y0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ppp4r4Q8C0Y0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ppp4r4Q8C0Y0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ppp4r4Q8C0Y0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Ppp4r4Q8C0Y0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ppp4r4Q8C0Y0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.21■■□□□ 1.15
Ppp4r4Q8C0Y0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.21■■□□□ 1.15
Ppp4r4Q8C0Y0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ppp4r4Q8C0Y0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ppp4r4Q8C0Y0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ppp4r4Q8C0Y0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Ppp4r4Q8C0Y0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ppp4r4Q8C0Y0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ppp4r4Q8C0Y0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ppp4r4Q8C0Y0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ppp4r4Q8C0Y0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ppp4r4Q8C0Y0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ppp4r4Q8C0Y0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ppp4r4Q8C0Y0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ppp4r4Q8C0Y0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ppp4r4Q8C0Y0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.18■■□□□ 1.14
Ppp4r4Q8C0Y0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.18■■□□□ 1.14
Ppp4r4Q8C0Y0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.18■■□□□ 1.14
Ppp4r4Q8C0Y0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ppp4r4Q8C0Y0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ppp4r4Q8C0Y0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ppp4r4Q8C0Y0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ppp4r4Q8C0Y0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.17■■□□□ 1.14
Ppp4r4Q8C0Y0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Ppp4r4Q8C0Y0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ppp4r4Q8C0Y0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ppp4r4Q8C0Y0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ppp4r4Q8C0Y0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ppp4r4Q8C0Y0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.16■■□□□ 1.14
Ppp4r4Q8C0Y0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms