Protein–RNA interactions for Protein: Q8BR56

Gm9881, Predicted gene 9881, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9881Q8BR56 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm9881Q8BR56 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm9881Q8BR56 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.39■■□□□ 1.01
Gm9881Q8BR56 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm9881Q8BR56 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm9881Q8BR56 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.38■■□□□ 1.01
Gm9881Q8BR56 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.38■■□□□ 1.01
Gm9881Q8BR56 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm9881Q8BR56 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm9881Q8BR56 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm9881Q8BR56 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm9881Q8BR56 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm9881Q8BR56 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm9881Q8BR56 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm9881Q8BR56 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.36■■□□□ 1.01
Gm9881Q8BR56 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm9881Q8BR56 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.36■■□□□ 1.01
Gm9881Q8BR56 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm9881Q8BR56 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm9881Q8BR56 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Gm9881Q8BR56 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.34■■□□□ 1.01
Gm9881Q8BR56 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.34■■□□□ 1.01
Gm9881Q8BR56 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.33■■□□□ 1
Gm9881Q8BR56 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Gm9881Q8BR56 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm9881Q8BR56 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.32■■□□□ 1
Gm9881Q8BR56 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm9881Q8BR56 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Gm9881Q8BR56 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.32■■□□□ 1
Gm9881Q8BR56 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm9881Q8BR56 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm9881Q8BR56 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm9881Q8BR56 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm9881Q8BR56 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.31■■□□□ 1
Gm9881Q8BR56 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm9881Q8BR56 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm9881Q8BR56 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm9881Q8BR56 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm9881Q8BR56 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm9881Q8BR56 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm9881Q8BR56 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm9881Q8BR56 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm9881Q8BR56 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm9881Q8BR56 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm9881Q8BR56 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm9881Q8BR56 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.28■■□□□ 1
Gm9881Q8BR56 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm9881Q8BR56 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm9881Q8BR56 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm9881Q8BR56 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm9881Q8BR56 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm9881Q8BR56 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm9881Q8BR56 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm9881Q8BR56 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Gm9881Q8BR56 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm9881Q8BR56 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.27■■□□□ 1
Gm9881Q8BR56 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm9881Q8BR56 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.26■□□□□ 0.99
Gm9881Q8BR56 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Gm9881Q8BR56 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm9881Q8BR56 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Gm9881Q8BR56 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm9881Q8BR56 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Gm9881Q8BR56 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm9881Q8BR56 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm9881Q8BR56 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm9881Q8BR56 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm9881Q8BR56 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm9881Q8BR56 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm9881Q8BR56 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm9881Q8BR56 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Gm9881Q8BR56 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm9881Q8BR56 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm9881Q8BR56 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm9881Q8BR56 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gm9881Q8BR56 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm9881Q8BR56 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm9881Q8BR56 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm9881Q8BR56 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm9881Q8BR56 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gm9881Q8BR56 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm9881Q8BR56 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm9881Q8BR56 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.21■□□□□ 0.99
Gm9881Q8BR56 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.21■□□□□ 0.99
Gm9881Q8BR56 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm9881Q8BR56 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gm9881Q8BR56 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Gm9881Q8BR56 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm9881Q8BR56 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm9881Q8BR56 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gm9881Q8BR56 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm9881Q8BR56 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms