Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cpsf4Q8BQZ5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpsf4Q8BQZ5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Cpsf4Q8BQZ5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.46■■□□□ 1.03
Cpsf4Q8BQZ5 Mir6538-201ENSMUST00000183713 110 ntBASIC21.46■■□□□ 1.03
Cpsf4Q8BQZ5 Gm9812-201ENSMUST00000061934 968 ntBASIC21.46■■□□□ 1.03
Cpsf4Q8BQZ5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cpsf4Q8BQZ5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cpsf4Q8BQZ5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cpsf4Q8BQZ5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.45■■□□□ 1.02
Cpsf4Q8BQZ5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.45■■□□□ 1.02
Cpsf4Q8BQZ5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cpsf4Q8BQZ5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpsf4Q8BQZ5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.44■■□□□ 1.02
Cpsf4Q8BQZ5 Gm16437-201ENSMUST00000025669 507 ntBASIC21.44■■□□□ 1.02
Cpsf4Q8BQZ5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cpsf4Q8BQZ5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cpsf4Q8BQZ5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Cpsf4Q8BQZ5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Gm9806-201ENSMUST00000051080 552 ntBASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf4Q8BQZ5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf4Q8BQZ5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf4Q8BQZ5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf4Q8BQZ5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf4Q8BQZ5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf4Q8BQZ5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf4Q8BQZ5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf4Q8BQZ5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf4Q8BQZ5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf4Q8BQZ5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cpsf4Q8BQZ5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf4Q8BQZ5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.4■■□□□ 1.02
Cpsf4Q8BQZ5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf4Q8BQZ5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.4■■□□□ 1.02
Cpsf4Q8BQZ5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf4Q8BQZ5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpsf4Q8BQZ5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpsf4Q8BQZ5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf4Q8BQZ5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf4Q8BQZ5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf4Q8BQZ5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf4Q8BQZ5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf4Q8BQZ5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpsf4Q8BQZ5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cpsf4Q8BQZ5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cpsf4Q8BQZ5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Cpsf4Q8BQZ5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpsf4Q8BQZ5 Gm11687-201ENSMUST00000118911 886 ntBASIC21.37■■□□□ 1.01
Cpsf4Q8BQZ5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cpsf4Q8BQZ5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpsf4Q8BQZ5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpsf4Q8BQZ5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Cpsf4Q8BQZ5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpsf4Q8BQZ5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpsf4Q8BQZ5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cpsf4Q8BQZ5 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.35■■□□□ 1.01
Cpsf4Q8BQZ5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cpsf4Q8BQZ5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cpsf4Q8BQZ5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cpsf4Q8BQZ5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cpsf4Q8BQZ5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cpsf4Q8BQZ5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpsf4Q8BQZ5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpsf4Q8BQZ5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cpsf4Q8BQZ5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpsf4Q8BQZ5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpsf4Q8BQZ5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cpsf4Q8BQZ5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.33■■□□□ 1.01
Cpsf4Q8BQZ5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
Cpsf4Q8BQZ5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cpsf4Q8BQZ5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cpsf4Q8BQZ5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cpsf4Q8BQZ5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cpsf4Q8BQZ5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cpsf4Q8BQZ5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cpsf4Q8BQZ5 Cap2-205ENSMUST00000225824 1634 ntBASIC21.3■■□□□ 1
Cpsf4Q8BQZ5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpsf4Q8BQZ5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpsf4Q8BQZ5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Cpsf4Q8BQZ5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cpsf4Q8BQZ5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.29■■□□□ 1
Cpsf4Q8BQZ5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms