Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf18Q8BM39 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf18Q8BM39 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf18Q8BM39 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf18Q8BM39 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Prpf18Q8BM39 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf18Q8BM39 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf18Q8BM39 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Prpf18Q8BM39 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf18Q8BM39 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf18Q8BM39 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf18Q8BM39 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.04■□□□□ 0.96
Prpf18Q8BM39 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf18Q8BM39 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf18Q8BM39 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf18Q8BM39 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf18Q8BM39 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf18Q8BM39 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf18Q8BM39 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Prpf18Q8BM39 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.02■□□□□ 0.95
Prpf18Q8BM39 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Prpf18Q8BM39 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf18Q8BM39 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf18Q8BM39 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf18Q8BM39 Gm42809-201ENSMUST00000198429 1138 ntBASIC21■□□□□ 0.95
Prpf18Q8BM39 Gm6277-202ENSMUST00000224036 2779 ntBASIC21■□□□□ 0.95
Prpf18Q8BM39 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prpf18Q8BM39 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf18Q8BM39 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Gm6821-201ENSMUST00000107540 542 ntBASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf18Q8BM39 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.97■□□□□ 0.95
Prpf18Q8BM39 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf18Q8BM39 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf18Q8BM39 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf18Q8BM39 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Prpf18Q8BM39 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf18Q8BM39 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms