Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Col16a1Q8BLX7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Col16a1Q8BLX7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Col16a1Q8BLX7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.27■■■□□ 2.44
Col16a1Q8BLX7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC30.27■■■□□ 2.44
Col16a1Q8BLX7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Col16a1Q8BLX7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Col16a1Q8BLX7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Col16a1Q8BLX7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Col16a1Q8BLX7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Col16a1Q8BLX7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Col16a1Q8BLX7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC30.25■■■□□ 2.43
Col16a1Q8BLX7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Col16a1Q8BLX7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Col16a1Q8BLX7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Col16a1Q8BLX7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Col16a1Q8BLX7 AC117769.4-201ENSMUST00000225679 685 ntBASIC30.24■■■□□ 2.43
Col16a1Q8BLX7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Col16a1Q8BLX7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Col16a1Q8BLX7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Col16a1Q8BLX7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Col16a1Q8BLX7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Col16a1Q8BLX7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Col16a1Q8BLX7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Col16a1Q8BLX7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Col16a1Q8BLX7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.21■■■□□ 2.43
Col16a1Q8BLX7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Col16a1Q8BLX7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC30.21■■■□□ 2.43
Col16a1Q8BLX7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC30.21■■■□□ 2.43
Col16a1Q8BLX7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Col16a1Q8BLX7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Col16a1Q8BLX7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC30.2■■■□□ 2.43
Col16a1Q8BLX7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
Col16a1Q8BLX7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC30.19■■■□□ 2.42
Col16a1Q8BLX7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC30.19■■■□□ 2.42
Col16a1Q8BLX7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Col16a1Q8BLX7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
Col16a1Q8BLX7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Col16a1Q8BLX7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Col16a1Q8BLX7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Col16a1Q8BLX7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Col16a1Q8BLX7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Col16a1Q8BLX7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
Col16a1Q8BLX7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
Col16a1Q8BLX7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Col16a1Q8BLX7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC30.17■■■□□ 2.42
Col16a1Q8BLX7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Col16a1Q8BLX7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Col16a1Q8BLX7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Col16a1Q8BLX7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
Col16a1Q8BLX7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Col16a1Q8BLX7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Col16a1Q8BLX7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
Col16a1Q8BLX7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Col16a1Q8BLX7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Col16a1Q8BLX7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Col16a1Q8BLX7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC30.14■■■□□ 2.42
Col16a1Q8BLX7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC30.14■■■□□ 2.42
Col16a1Q8BLX7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Col16a1Q8BLX7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Col16a1Q8BLX7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC30.13■■■□□ 2.41
Col16a1Q8BLX7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Col16a1Q8BLX7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Col16a1Q8BLX7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC30.11■■■□□ 2.41
Col16a1Q8BLX7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
Col16a1Q8BLX7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Col16a1Q8BLX7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Col16a1Q8BLX7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Col16a1Q8BLX7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Col16a1Q8BLX7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Col16a1Q8BLX7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Col16a1Q8BLX7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Col16a1Q8BLX7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Col16a1Q8BLX7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Col16a1Q8BLX7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Col16a1Q8BLX7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Col16a1Q8BLX7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Col16a1Q8BLX7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Col16a1Q8BLX7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Col16a1Q8BLX7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Col16a1Q8BLX7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Col16a1Q8BLX7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Col16a1Q8BLX7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Col16a1Q8BLX7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC30.05■■■□□ 2.4
Col16a1Q8BLX7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Col16a1Q8BLX7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Col16a1Q8BLX7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Col16a1Q8BLX7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Col16a1Q8BLX7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Col16a1Q8BLX7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Col16a1Q8BLX7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
Col16a1Q8BLX7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Col16a1Q8BLX7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Col16a1Q8BLX7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Col16a1Q8BLX7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC30.03■■■□□ 2.4
Col16a1Q8BLX7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Col16a1Q8BLX7 Gm10232-201ENSMUST00000089221 720 ntBASIC30.02■■■□□ 2.4
Col16a1Q8BLX7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Col16a1Q8BLX7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Col16a1Q8BLX7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC30■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms