Protein–RNA interactions for Protein: Q8BLK3

Lsamp, Limbic system-associated membrane protein, mousemouse

Predictions only

Length 341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LsampQ8BLK3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LsampQ8BLK3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LsampQ8BLK3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LsampQ8BLK3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LsampQ8BLK3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.17■□□□□ 0.82
LsampQ8BLK3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LsampQ8BLK3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LsampQ8BLK3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LsampQ8BLK3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LsampQ8BLK3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LsampQ8BLK3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LsampQ8BLK3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LsampQ8BLK3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LsampQ8BLK3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LsampQ8BLK3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
LsampQ8BLK3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.15■□□□□ 0.82
LsampQ8BLK3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.15■□□□□ 0.82
LsampQ8BLK3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LsampQ8BLK3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.15■□□□□ 0.82
LsampQ8BLK3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LsampQ8BLK3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LsampQ8BLK3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LsampQ8BLK3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LsampQ8BLK3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LsampQ8BLK3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LsampQ8BLK3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LsampQ8BLK3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LsampQ8BLK3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.13■□□□□ 0.81
LsampQ8BLK3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LsampQ8BLK3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LsampQ8BLK3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LsampQ8BLK3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LsampQ8BLK3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.12■□□□□ 0.81
LsampQ8BLK3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LsampQ8BLK3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LsampQ8BLK3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LsampQ8BLK3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LsampQ8BLK3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LsampQ8BLK3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LsampQ8BLK3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LsampQ8BLK3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LsampQ8BLK3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LsampQ8BLK3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.09■□□□□ 0.81
LsampQ8BLK3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LsampQ8BLK3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LsampQ8BLK3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LsampQ8BLK3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LsampQ8BLK3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LsampQ8BLK3 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.08■□□□□ 0.8
LsampQ8BLK3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LsampQ8BLK3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LsampQ8BLK3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LsampQ8BLK3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LsampQ8BLK3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
LsampQ8BLK3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LsampQ8BLK3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
LsampQ8BLK3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LsampQ8BLK3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LsampQ8BLK3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.07■□□□□ 0.8
LsampQ8BLK3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LsampQ8BLK3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LsampQ8BLK3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LsampQ8BLK3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LsampQ8BLK3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LsampQ8BLK3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.06■□□□□ 0.8
LsampQ8BLK3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LsampQ8BLK3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LsampQ8BLK3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LsampQ8BLK3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LsampQ8BLK3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LsampQ8BLK3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LsampQ8BLK3 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.03■□□□□ 0.8
LsampQ8BLK3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
LsampQ8BLK3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LsampQ8BLK3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LsampQ8BLK3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LsampQ8BLK3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LsampQ8BLK3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LsampQ8BLK3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LsampQ8BLK3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LsampQ8BLK3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LsampQ8BLK3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.01■□□□□ 0.79
LsampQ8BLK3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.01■□□□□ 0.79
LsampQ8BLK3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms