Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdhr3Q8BL00 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdhr3Q8BL00 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Cdhr3Q8BL00 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdhr3Q8BL00 Gm6821-201ENSMUST00000107540 542 ntBASIC19.45■□□□□ 0.7
Cdhr3Q8BL00 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdhr3Q8BL00 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdhr3Q8BL00 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdhr3Q8BL00 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdhr3Q8BL00 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdhr3Q8BL00 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdhr3Q8BL00 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdhr3Q8BL00 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.42■□□□□ 0.7
Cdhr3Q8BL00 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.42■□□□□ 0.7
Cdhr3Q8BL00 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdhr3Q8BL00 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdhr3Q8BL00 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdhr3Q8BL00 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdhr3Q8BL00 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdhr3Q8BL00 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdhr3Q8BL00 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdhr3Q8BL00 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdhr3Q8BL00 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.38■□□□□ 0.69
Cdhr3Q8BL00 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdhr3Q8BL00 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdhr3Q8BL00 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdhr3Q8BL00 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdhr3Q8BL00 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdhr3Q8BL00 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdhr3Q8BL00 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cdhr3Q8BL00 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cdhr3Q8BL00 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdhr3Q8BL00 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdhr3Q8BL00 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.37■□□□□ 0.69
Cdhr3Q8BL00 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr3Q8BL00 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cdhr3Q8BL00 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdhr3Q8BL00 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cdhr3Q8BL00 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdhr3Q8BL00 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.36■□□□□ 0.69
Cdhr3Q8BL00 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cdhr3Q8BL00 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Cdhr3Q8BL00 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdhr3Q8BL00 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdhr3Q8BL00 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdhr3Q8BL00 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.34■□□□□ 0.69
Cdhr3Q8BL00 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.34■□□□□ 0.69
Cdhr3Q8BL00 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdhr3Q8BL00 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdhr3Q8BL00 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.33■□□□□ 0.68
Cdhr3Q8BL00 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdhr3Q8BL00 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdhr3Q8BL00 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.32■□□□□ 0.68
Cdhr3Q8BL00 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.32■□□□□ 0.68
Cdhr3Q8BL00 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
Cdhr3Q8BL00 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr3Q8BL00 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.32■□□□□ 0.68
Cdhr3Q8BL00 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdhr3Q8BL00 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cdhr3Q8BL00 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr3Q8BL00 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr3Q8BL00 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr3Q8BL00 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdhr3Q8BL00 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cdhr3Q8BL00 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdhr3Q8BL00 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdhr3Q8BL00 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cdhr3Q8BL00 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.29■□□□□ 0.68
Cdhr3Q8BL00 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cdhr3Q8BL00 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cdhr3Q8BL00 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdhr3Q8BL00 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdhr3Q8BL00 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdhr3Q8BL00 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms