Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3bQ8BHK2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn3bQ8BHK2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Scn3bQ8BHK2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3bQ8BHK2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3bQ8BHK2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3bQ8BHK2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn3bQ8BHK2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Scn3bQ8BHK2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3bQ8BHK2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.76■□□□□ 0.91
Scn3bQ8BHK2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn3bQ8BHK2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn3bQ8BHK2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Scn3bQ8BHK2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn3bQ8BHK2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scn3bQ8BHK2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn3bQ8BHK2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn3bQ8BHK2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn3bQ8BHK2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn3bQ8BHK2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Scn3bQ8BHK2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scn3bQ8BHK2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3bQ8BHK2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3bQ8BHK2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3bQ8BHK2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3bQ8BHK2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3bQ8BHK2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3bQ8BHK2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3bQ8BHK2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3bQ8BHK2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3bQ8BHK2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Scn3bQ8BHK2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3bQ8BHK2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3bQ8BHK2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3bQ8BHK2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3bQ8BHK2 Gm24970-201ENSMUST00000175582 82 ntBASIC20.71■□□□□ 0.91
Scn3bQ8BHK2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Scn3bQ8BHK2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3bQ8BHK2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Scn3bQ8BHK2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.7■□□□□ 0.9
Scn3bQ8BHK2 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.7■□□□□ 0.9
Scn3bQ8BHK2 Zfp131-205ENSMUST00000223812 663 ntBASIC20.7■□□□□ 0.9
Scn3bQ8BHK2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3bQ8BHK2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3bQ8BHK2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3bQ8BHK2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.69■□□□□ 0.9
Scn3bQ8BHK2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3bQ8BHK2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3bQ8BHK2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3bQ8BHK2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3bQ8BHK2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3bQ8BHK2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.68■□□□□ 0.9
Scn3bQ8BHK2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3bQ8BHK2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3bQ8BHK2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3bQ8BHK2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3bQ8BHK2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3bQ8BHK2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Scn3bQ8BHK2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3bQ8BHK2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.67■□□□□ 0.9
Scn3bQ8BHK2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3bQ8BHK2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn3bQ8BHK2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn3bQ8BHK2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.66■□□□□ 0.9
Scn3bQ8BHK2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scn3bQ8BHK2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Scn3bQ8BHK2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scn3bQ8BHK2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scn3bQ8BHK2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.65■□□□□ 0.9
Scn3bQ8BHK2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn3bQ8BHK2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.65■□□□□ 0.9
Scn3bQ8BHK2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Scn3bQ8BHK2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn3bQ8BHK2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn3bQ8BHK2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Scn3bQ8BHK2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn3bQ8BHK2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn3bQ8BHK2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.63■□□□□ 0.89
Scn3bQ8BHK2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn3bQ8BHK2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scn3bQ8BHK2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn3bQ8BHK2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.61■□□□□ 0.89
Scn3bQ8BHK2 Gm9397-201ENSMUST00000200125 605 ntBASIC20.61■□□□□ 0.89
Scn3bQ8BHK2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn3bQ8BHK2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.6■□□□□ 0.89
Scn3bQ8BHK2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scn3bQ8BHK2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn3bQ8BHK2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scn3bQ8BHK2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn3bQ8BHK2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Scn3bQ8BHK2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn3bQ8BHK2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms