Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.6■■□□□ 1.05
Trim23Q8BGX0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim23Q8BGX0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim23Q8BGX0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim23Q8BGX0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim23Q8BGX0 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.59■■□□□ 1.05
Trim23Q8BGX0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim23Q8BGX0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Trim23Q8BGX0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim23Q8BGX0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim23Q8BGX0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim23Q8BGX0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim23Q8BGX0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim23Q8BGX0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Trim23Q8BGX0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim23Q8BGX0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim23Q8BGX0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim23Q8BGX0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.56■■□□□ 1.04
Trim23Q8BGX0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim23Q8BGX0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim23Q8BGX0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim23Q8BGX0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim23Q8BGX0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim23Q8BGX0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim23Q8BGX0 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.55■■□□□ 1.04
Trim23Q8BGX0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim23Q8BGX0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim23Q8BGX0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim23Q8BGX0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim23Q8BGX0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim23Q8BGX0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim23Q8BGX0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim23Q8BGX0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim23Q8BGX0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim23Q8BGX0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim23Q8BGX0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim23Q8BGX0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.52■■□□□ 1.04
Trim23Q8BGX0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim23Q8BGX0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim23Q8BGX0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim23Q8BGX0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim23Q8BGX0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim23Q8BGX0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim23Q8BGX0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim23Q8BGX0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trim23Q8BGX0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim23Q8BGX0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim23Q8BGX0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim23Q8BGX0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim23Q8BGX0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim23Q8BGX0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim23Q8BGX0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim23Q8BGX0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim23Q8BGX0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim23Q8BGX0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim23Q8BGX0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim23Q8BGX0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Trim23Q8BGX0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim23Q8BGX0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim23Q8BGX0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trim23Q8BGX0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim23Q8BGX0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim23Q8BGX0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim23Q8BGX0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim23Q8BGX0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim23Q8BGX0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Trim23Q8BGX0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Trim23Q8BGX0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.44■■□□□ 1.02
Trim23Q8BGX0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim23Q8BGX0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim23Q8BGX0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.44■■□□□ 1.02
Trim23Q8BGX0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim23Q8BGX0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim23Q8BGX0 Gm10420-201ENSMUST00000121713 882 ntBASIC21.43■■□□□ 1.02
Trim23Q8BGX0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim23Q8BGX0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.43■■□□□ 1.02
Trim23Q8BGX0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim23Q8BGX0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim23Q8BGX0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Trim23Q8BGX0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim23Q8BGX0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trim23Q8BGX0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.41■■□□□ 1.02
Trim23Q8BGX0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim23Q8BGX0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim23Q8BGX0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim23Q8BGX0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.4■■□□□ 1.02
Trim23Q8BGX0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim23Q8BGX0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim23Q8BGX0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim23Q8BGX0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trim23Q8BGX0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.39■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms