Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Skida1Q80YR3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.57■■□□□ 1.04
Skida1Q80YR3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Skida1Q80YR3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Skida1Q80YR3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.57■■□□□ 1.04
Skida1Q80YR3 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC21.56■■□□□ 1.04
Skida1Q80YR3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.56■■□□□ 1.04
Skida1Q80YR3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.56■■□□□ 1.04
Skida1Q80YR3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Skida1Q80YR3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Skida1Q80YR3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Skida1Q80YR3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Skida1Q80YR3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Skida1Q80YR3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Skida1Q80YR3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Skida1Q80YR3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Skida1Q80YR3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.54■■□□□ 1.04
Skida1Q80YR3 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Skida1Q80YR3 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.54■■□□□ 1.04
Skida1Q80YR3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Skida1Q80YR3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Skida1Q80YR3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.53■■□□□ 1.04
Skida1Q80YR3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Skida1Q80YR3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Skida1Q80YR3 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.53■■□□□ 1.04
Skida1Q80YR3 Gm37319-201ENSMUST00000193500 636 ntBASIC21.53■■□□□ 1.04
Skida1Q80YR3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Skida1Q80YR3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Skida1Q80YR3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Skida1Q80YR3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Skida1Q80YR3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Skida1Q80YR3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Skida1Q80YR3 Gm12106-201ENSMUST00000116006 1200 ntBASIC21.52■■□□□ 1.04
Skida1Q80YR3 Gm18515-201ENSMUST00000219755 797 ntBASIC21.52■■□□□ 1.04
Skida1Q80YR3 Terc-201ENSMUST00000082862 423 ntBASIC21.52■■□□□ 1.04
Skida1Q80YR3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Skida1Q80YR3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Skida1Q80YR3 Gm42660-201ENSMUST00000197733 947 ntBASIC21.51■■□□□ 1.03
Skida1Q80YR3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Skida1Q80YR3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Skida1Q80YR3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Skida1Q80YR3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Skida1Q80YR3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Skida1Q80YR3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Skida1Q80YR3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Skida1Q80YR3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Skida1Q80YR3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Skida1Q80YR3 AC132260.2-201ENSMUST00000224482 344 ntBASIC21.49■■□□□ 1.03
Skida1Q80YR3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Skida1Q80YR3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Skida1Q80YR3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Skida1Q80YR3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Skida1Q80YR3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.48■■□□□ 1.03
Skida1Q80YR3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Skida1Q80YR3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Skida1Q80YR3 Gm44711-201ENSMUST00000205414 1264 ntBASIC21.47■■□□□ 1.03
Skida1Q80YR3 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Skida1Q80YR3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Skida1Q80YR3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Skida1Q80YR3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC21.46■■□□□ 1.03
Skida1Q80YR3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Skida1Q80YR3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Skida1Q80YR3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Skida1Q80YR3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Skida1Q80YR3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Skida1Q80YR3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Skida1Q80YR3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Skida1Q80YR3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Skida1Q80YR3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Skida1Q80YR3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Skida1Q80YR3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Skida1Q80YR3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Skida1Q80YR3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Skida1Q80YR3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Skida1Q80YR3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Skida1Q80YR3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.43■■□□□ 1.02
Skida1Q80YR3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Skida1Q80YR3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Skida1Q80YR3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Skida1Q80YR3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Skida1Q80YR3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Skida1Q80YR3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Skida1Q80YR3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Skida1Q80YR3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Skida1Q80YR3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.42■■□□□ 1.02
Skida1Q80YR3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Skida1Q80YR3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Skida1Q80YR3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Skida1Q80YR3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Skida1Q80YR3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Skida1Q80YR3 AC154634.3-201ENSMUST00000224589 736 ntBASIC21.41■■□□□ 1.02
Skida1Q80YR3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Skida1Q80YR3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Skida1Q80YR3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Skida1Q80YR3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Skida1Q80YR3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.4■■□□□ 1.02
Skida1Q80YR3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.4■■□□□ 1.02
Skida1Q80YR3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.4■■□□□ 1.02
Skida1Q80YR3 Rps24-207ENSMUST00000224568 714 ntBASIC21.4■■□□□ 1.02
Skida1Q80YR3 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms