Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC35.63■■■■□ 3.29
Rpap1Q80TE0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Rpap1Q80TE0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Rpap1Q80TE0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Rpap1Q80TE0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC35.6■■■■□ 3.29
Rpap1Q80TE0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Rpap1Q80TE0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
Rpap1Q80TE0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
Rpap1Q80TE0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC35.59■■■■□ 3.29
Rpap1Q80TE0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC35.58■■■■□ 3.29
Rpap1Q80TE0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Rpap1Q80TE0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC35.57■■■■□ 3.28
Rpap1Q80TE0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
Rpap1Q80TE0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC35.56■■■■□ 3.28
Rpap1Q80TE0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC35.56■■■■□ 3.28
Rpap1Q80TE0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Rpap1Q80TE0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC35.56■■■■□ 3.28
Rpap1Q80TE0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC35.55■■■■□ 3.28
Rpap1Q80TE0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC35.54■■■■□ 3.28
Rpap1Q80TE0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Rpap1Q80TE0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
Rpap1Q80TE0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC35.54■■■■□ 3.28
Rpap1Q80TE0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
Rpap1Q80TE0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Rpap1Q80TE0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Rpap1Q80TE0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Rpap1Q80TE0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Rpap1Q80TE0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC35.52■■■■□ 3.28
Rpap1Q80TE0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Rpap1Q80TE0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Rpap1Q80TE0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
Rpap1Q80TE0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC35.51■■■■□ 3.28
Rpap1Q80TE0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC35.5■■■■□ 3.27
Rpap1Q80TE0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Rpap1Q80TE0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Rpap1Q80TE0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Rpap1Q80TE0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Rpap1Q80TE0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Rpap1Q80TE0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC35.48■■■■□ 3.27
Rpap1Q80TE0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Rpap1Q80TE0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
Rpap1Q80TE0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Rpap1Q80TE0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Rpap1Q80TE0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
Rpap1Q80TE0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Rpap1Q80TE0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Rpap1Q80TE0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Rpap1Q80TE0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
Rpap1Q80TE0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC35.44■■■■□ 3.26
Rpap1Q80TE0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC35.44■■■■□ 3.26
Rpap1Q80TE0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Rpap1Q80TE0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC35.43■■■■□ 3.26
Rpap1Q80TE0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Rpap1Q80TE0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Rpap1Q80TE0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Rpap1Q80TE0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC35.41■■■■□ 3.26
Rpap1Q80TE0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Rpap1Q80TE0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC35.41■■■■□ 3.26
Rpap1Q80TE0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Rpap1Q80TE0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC35.4■■■■□ 3.26
Rpap1Q80TE0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Rpap1Q80TE0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Rpap1Q80TE0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Rpap1Q80TE0 Gm10232-201ENSMUST00000089221 720 ntBASIC35.4■■■■□ 3.26
Rpap1Q80TE0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Rpap1Q80TE0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Rpap1Q80TE0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Rpap1Q80TE0 Gm7199-201ENSMUST00000118327 1485 ntBASIC35.39■■■■□ 3.26
Rpap1Q80TE0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
Rpap1Q80TE0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC35.39■■■■□ 3.26
Rpap1Q80TE0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC35.39■■■■□ 3.26
Rpap1Q80TE0 Fezf2-202ENSMUST00000224023 1917 ntBASIC35.39■■■■□ 3.26
Rpap1Q80TE0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Rpap1Q80TE0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Rpap1Q80TE0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Rpap1Q80TE0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Rpap1Q80TE0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Rpap1Q80TE0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC35.36■■■■□ 3.25
Rpap1Q80TE0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Rpap1Q80TE0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC35.35■■■■□ 3.25
Rpap1Q80TE0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC35.35■■■■□ 3.25
Rpap1Q80TE0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Rpap1Q80TE0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC35.34■■■■□ 3.25
Rpap1Q80TE0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC35.33■■■■□ 3.25
Rpap1Q80TE0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC35.33■■■■□ 3.25
Rpap1Q80TE0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Rpap1Q80TE0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
Rpap1Q80TE0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Rpap1Q80TE0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Rpap1Q80TE0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.25
Rpap1Q80TE0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.25
Rpap1Q80TE0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Rpap1Q80TE0 Etf1-202ENSMUST00000180351 108 ntBASIC35.32■■■■□ 3.24
Rpap1Q80TE0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Rpap1Q80TE0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Rpap1Q80TE0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
Rpap1Q80TE0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC35.3■■■■□ 3.24
Rpap1Q80TE0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC35.3■■■■□ 3.24
Rpap1Q80TE0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Rpap1Q80TE0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms