Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scn10aQ6QIY3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
Scn10aQ6QIY3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn10aQ6QIY3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn10aQ6QIY3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn10aQ6QIY3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
Scn10aQ6QIY3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Scn10aQ6QIY3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn10aQ6QIY3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn10aQ6QIY3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn10aQ6QIY3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.25■■□□□ 1.79
Scn10aQ6QIY3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Scn10aQ6QIY3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scn10aQ6QIY3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scn10aQ6QIY3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Scn10aQ6QIY3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Scn10aQ6QIY3 Gm10232-201ENSMUST00000089221 720 ntBASIC26.22■■□□□ 1.79
Scn10aQ6QIY3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scn10aQ6QIY3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Scn10aQ6QIY3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Scn10aQ6QIY3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Scn10aQ6QIY3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Scn10aQ6QIY3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Scn10aQ6QIY3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Scn10aQ6QIY3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Scn10aQ6QIY3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC26.2■■□□□ 1.78
Scn10aQ6QIY3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scn10aQ6QIY3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Amer2-203ENSMUST00000225247 2662 ntBASIC26.18■■□□□ 1.78
Scn10aQ6QIY3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Scn10aQ6QIY3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scn10aQ6QIY3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scn10aQ6QIY3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scn10aQ6QIY3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scn10aQ6QIY3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26.15■■□□□ 1.78
Scn10aQ6QIY3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Scn10aQ6QIY3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.14■■□□□ 1.77
Scn10aQ6QIY3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
Scn10aQ6QIY3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scn10aQ6QIY3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Scn10aQ6QIY3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scn10aQ6QIY3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Scn10aQ6QIY3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Scn10aQ6QIY3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Scn10aQ6QIY3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Scn10aQ6QIY3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Scn10aQ6QIY3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.1■■□□□ 1.77
Scn10aQ6QIY3 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.1■■□□□ 1.77
Scn10aQ6QIY3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Scn10aQ6QIY3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.09■■□□□ 1.77
Scn10aQ6QIY3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Scn10aQ6QIY3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.09■■□□□ 1.77
Scn10aQ6QIY3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Scn10aQ6QIY3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Scn10aQ6QIY3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Scn10aQ6QIY3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.07■■□□□ 1.76
Scn10aQ6QIY3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Scn10aQ6QIY3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Scn10aQ6QIY3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scn10aQ6QIY3 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
Scn10aQ6QIY3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC26.04■■□□□ 1.76
Scn10aQ6QIY3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Scn10aQ6QIY3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms