Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim45Q6PFY8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim45Q6PFY8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim45Q6PFY8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.92■□□□□ 0.94
Trim45Q6PFY8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim45Q6PFY8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim45Q6PFY8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim45Q6PFY8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim45Q6PFY8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim45Q6PFY8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim45Q6PFY8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim45Q6PFY8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim45Q6PFY8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim45Q6PFY8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim45Q6PFY8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim45Q6PFY8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim45Q6PFY8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim45Q6PFY8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim45Q6PFY8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim45Q6PFY8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
Trim45Q6PFY8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.89■□□□□ 0.94
Trim45Q6PFY8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Trim45Q6PFY8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim45Q6PFY8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim45Q6PFY8 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.89■□□□□ 0.94
Trim45Q6PFY8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim45Q6PFY8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim45Q6PFY8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.89■□□□□ 0.93
Trim45Q6PFY8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim45Q6PFY8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim45Q6PFY8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim45Q6PFY8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim45Q6PFY8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim45Q6PFY8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim45Q6PFY8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.88■□□□□ 0.93
Trim45Q6PFY8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim45Q6PFY8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim45Q6PFY8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim45Q6PFY8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim45Q6PFY8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim45Q6PFY8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim45Q6PFY8 Terc-201ENSMUST00000082862 423 ntBASIC20.87■□□□□ 0.93
Trim45Q6PFY8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim45Q6PFY8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim45Q6PFY8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim45Q6PFY8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim45Q6PFY8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim45Q6PFY8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim45Q6PFY8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim45Q6PFY8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim45Q6PFY8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim45Q6PFY8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim45Q6PFY8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim45Q6PFY8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim45Q6PFY8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Trim45Q6PFY8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim45Q6PFY8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim45Q6PFY8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim45Q6PFY8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim45Q6PFY8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim45Q6PFY8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim45Q6PFY8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim45Q6PFY8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim45Q6PFY8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim45Q6PFY8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim45Q6PFY8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim45Q6PFY8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim45Q6PFY8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim45Q6PFY8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim45Q6PFY8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim45Q6PFY8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim45Q6PFY8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim45Q6PFY8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim45Q6PFY8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim45Q6PFY8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim45Q6PFY8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim45Q6PFY8 Gm14523-201ENSMUST00000117260 558 ntBASIC20.78■□□□□ 0.92
Trim45Q6PFY8 Gm27502-201ENSMUST00000183495 199 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms