Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.52■■■□□ 2.16
Clcn1Q64347 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Clcn1Q64347 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Clcn1Q64347 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Clcn1Q64347 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Clcn1Q64347 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Clcn1Q64347 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
Clcn1Q64347 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Clcn1Q64347 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Clcn1Q64347 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Clcn1Q64347 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Clcn1Q64347 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Clcn1Q64347 Gm45444-201ENSMUST00000211394 898 ntBASIC28.49■■■□□ 2.15
Clcn1Q64347 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.49■■■□□ 2.15
Clcn1Q64347 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Clcn1Q64347 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Clcn1Q64347 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Clcn1Q64347 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Clcn1Q64347 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Clcn1Q64347 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Clcn1Q64347 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.47■■■□□ 2.15
Clcn1Q64347 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Clcn1Q64347 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Clcn1Q64347 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Clcn1Q64347 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28.46■■■□□ 2.15
Clcn1Q64347 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
Clcn1Q64347 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Clcn1Q64347 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
Clcn1Q64347 Rps24-207ENSMUST00000224568 714 ntBASIC28.45■■■□□ 2.14
Clcn1Q64347 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC28.45■■■□□ 2.14
Clcn1Q64347 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Clcn1Q64347 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Clcn1Q64347 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Clcn1Q64347 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Clcn1Q64347 Gm14117-201ENSMUST00000122417 843 ntBASIC28.44■■■□□ 2.14
Clcn1Q64347 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.44■■■□□ 2.14
Clcn1Q64347 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Clcn1Q64347 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Clcn1Q64347 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Clcn1Q64347 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Clcn1Q64347 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.43■■■□□ 2.14
Clcn1Q64347 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Clcn1Q64347 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Clcn1Q64347 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC28.41■■■□□ 2.14
Clcn1Q64347 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Clcn1Q64347 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Clcn1Q64347 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Clcn1Q64347 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Clcn1Q64347 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.4■■■□□ 2.14
Clcn1Q64347 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.4■■■□□ 2.14
Clcn1Q64347 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Clcn1Q64347 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
Clcn1Q64347 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.4■■■□□ 2.14
Clcn1Q64347 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Clcn1Q64347 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Clcn1Q64347 Gm45102-201ENSMUST00000207427 857 ntBASIC28.39■■■□□ 2.14
Clcn1Q64347 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Clcn1Q64347 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Clcn1Q64347 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Clcn1Q64347 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Clcn1Q64347 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC28.37■■■□□ 2.13
Clcn1Q64347 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Clcn1Q64347 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Clcn1Q64347 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Clcn1Q64347 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Clcn1Q64347 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Clcn1Q64347 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Clcn1Q64347 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Clcn1Q64347 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Clcn1Q64347 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Clcn1Q64347 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
Clcn1Q64347 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.35■■■□□ 2.13
Clcn1Q64347 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Clcn1Q64347 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Clcn1Q64347 Gm9959-201ENSMUST00000068277 390 ntBASIC28.35■■■□□ 2.13
Clcn1Q64347 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Clcn1Q64347 AC164433.2-201ENSMUST00000226346 1701 ntBASIC28.35■■■□□ 2.13
Clcn1Q64347 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.34■■■□□ 2.13
Clcn1Q64347 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC28.34■■■□□ 2.13
Clcn1Q64347 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC28.34■■■□□ 2.13
Clcn1Q64347 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Clcn1Q64347 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Clcn1Q64347 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Clcn1Q64347 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Clcn1Q64347 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
Clcn1Q64347 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Clcn1Q64347 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Clcn1Q64347 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Clcn1Q64347 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Clcn1Q64347 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Clcn1Q64347 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Clcn1Q64347 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Clcn1Q64347 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Clcn1Q64347 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms