Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.32■■□□□ 1
CishQ62225 Gm14523-201ENSMUST00000117260 558 ntBASIC21.32■■□□□ 1
CishQ62225 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CishQ62225 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.32■■□□□ 1
CishQ62225 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CishQ62225 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CishQ62225 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CishQ62225 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.31■■□□□ 1
CishQ62225 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CishQ62225 Cap2-205ENSMUST00000225824 1634 ntBASIC21.31■■□□□ 1
CishQ62225 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CishQ62225 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.31■■□□□ 1
CishQ62225 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.31■■□□□ 1
CishQ62225 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.31■■□□□ 1
CishQ62225 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CishQ62225 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CishQ62225 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.3■■□□□ 1
CishQ62225 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.29■■□□□ 1
CishQ62225 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CishQ62225 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CishQ62225 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CishQ62225 Gm7332-201ENSMUST00000118351 454 ntBASIC21.28■■□□□ 1
CishQ62225 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CishQ62225 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.27■■□□□ 1
CishQ62225 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CishQ62225 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.27■■□□□ 1
CishQ62225 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
CishQ62225 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CishQ62225 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CishQ62225 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.26■□□□□ 0.99
CishQ62225 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CishQ62225 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.26■□□□□ 0.99
CishQ62225 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CishQ62225 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CishQ62225 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CishQ62225 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.26■□□□□ 0.99
CishQ62225 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CishQ62225 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CishQ62225 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CishQ62225 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CishQ62225 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CishQ62225 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.25■□□□□ 0.99
CishQ62225 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CishQ62225 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CishQ62225 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CishQ62225 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CishQ62225 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CishQ62225 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CishQ62225 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CishQ62225 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CishQ62225 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.24■□□□□ 0.99
CishQ62225 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.24■□□□□ 0.99
CishQ62225 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CishQ62225 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CishQ62225 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CishQ62225 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.24■□□□□ 0.99
CishQ62225 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CishQ62225 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CishQ62225 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.23■□□□□ 0.99
CishQ62225 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CishQ62225 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CishQ62225 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CishQ62225 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CishQ62225 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.22■□□□□ 0.99
CishQ62225 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CishQ62225 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CishQ62225 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CishQ62225 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CishQ62225 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CishQ62225 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CishQ62225 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CishQ62225 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CishQ62225 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CishQ62225 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CishQ62225 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CishQ62225 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CishQ62225 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CishQ62225 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CishQ62225 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CishQ62225 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CishQ62225 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CishQ62225 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CishQ62225 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CishQ62225 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CishQ62225 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CishQ62225 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CishQ62225 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CishQ62225 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CishQ62225 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CishQ62225 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CishQ62225 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CishQ62225 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CishQ62225 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CishQ62225 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.15■□□□□ 0.98
CishQ62225 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CishQ62225 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.15■□□□□ 0.98
CishQ62225 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CishQ62225 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CishQ62225 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CishQ62225 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms