Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Sox17Q61473 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.93■□□□□ 0.94
Sox17Q61473 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox17Q61473 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox17Q61473 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.93■□□□□ 0.94
Sox17Q61473 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox17Q61473 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sox17Q61473 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox17Q61473 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox17Q61473 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox17Q61473 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sox17Q61473 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Sox17Q61473 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sox17Q61473 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox17Q61473 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox17Q61473 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Sox17Q61473 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Sox17Q61473 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sox17Q61473 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox17Q61473 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sox17Q61473 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox17Q61473 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.9■□□□□ 0.94
Sox17Q61473 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sox17Q61473 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox17Q61473 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox17Q61473 Gm45855-201ENSMUST00000212546 880 ntBASIC20.89■□□□□ 0.93
Sox17Q61473 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox17Q61473 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox17Q61473 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox17Q61473 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.88■□□□□ 0.93
Sox17Q61473 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox17Q61473 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.88■□□□□ 0.93
Sox17Q61473 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox17Q61473 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox17Q61473 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox17Q61473 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Sox17Q61473 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox17Q61473 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox17Q61473 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox17Q61473 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.87■□□□□ 0.93
Sox17Q61473 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.87■□□□□ 0.93
Sox17Q61473 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox17Q61473 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.86■□□□□ 0.93
Sox17Q61473 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.86■□□□□ 0.93
Sox17Q61473 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.86■□□□□ 0.93
Sox17Q61473 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.85■□□□□ 0.93
Sox17Q61473 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.85■□□□□ 0.93
Sox17Q61473 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox17Q61473 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.85■□□□□ 0.93
Sox17Q61473 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox17Q61473 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox17Q61473 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sox17Q61473 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sox17Q61473 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.84■□□□□ 0.93
Sox17Q61473 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sox17Q61473 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox17Q61473 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sox17Q61473 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sox17Q61473 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox17Q61473 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox17Q61473 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sox17Q61473 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox17Q61473 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox17Q61473 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox17Q61473 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox17Q61473 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox17Q61473 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sox17Q61473 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Sox17Q61473 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox17Q61473 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sox17Q61473 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox17Q61473 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox17Q61473 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.81■□□□□ 0.92
Sox17Q61473 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sox17Q61473 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.8■□□□□ 0.92
Sox17Q61473 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox17Q61473 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Sox17Q61473 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox17Q61473 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox17Q61473 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sox17Q61473 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox17Q61473 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox17Q61473 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox17Q61473 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox17Q61473 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox17Q61473 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sox17Q61473 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sox17Q61473 Gm37136-201ENSMUST00000194368 194 ntBASIC20.76■□□□□ 0.91
Sox17Q61473 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox17Q61473 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sox17Q61473 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox17Q61473 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox17Q61473 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox17Q61473 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox17Q61473 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sox17Q61473 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox17Q61473 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Sox17Q61473 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox17Q61473 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox17Q61473 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms