Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxf1Q61080 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxf1Q61080 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxf1Q61080 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxf1Q61080 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxf1Q61080 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxf1Q61080 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.69■□□□□ 0.58
Foxf1Q61080 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxf1Q61080 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxf1Q61080 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxf1Q61080 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxf1Q61080 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxf1Q61080 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxf1Q61080 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxf1Q61080 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxf1Q61080 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxf1Q61080 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxf1Q61080 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Foxf1Q61080 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxf1Q61080 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Foxf1Q61080 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.67■□□□□ 0.58
Foxf1Q61080 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.66■□□□□ 0.58
Foxf1Q61080 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.66■□□□□ 0.58
Foxf1Q61080 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxf1Q61080 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxf1Q61080 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxf1Q61080 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.65■□□□□ 0.58
Foxf1Q61080 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.65■□□□□ 0.58
Foxf1Q61080 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Foxf1Q61080 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxf1Q61080 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.64■□□□□ 0.57
Foxf1Q61080 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxf1Q61080 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxf1Q61080 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxf1Q61080 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Foxf1Q61080 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Foxf1Q61080 Gm6311-201ENSMUST00000073790 878 ntBASIC18.63■□□□□ 0.57
Foxf1Q61080 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxf1Q61080 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Foxf1Q61080 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxf1Q61080 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Foxf1Q61080 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxf1Q61080 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.62■□□□□ 0.57
Foxf1Q61080 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.62■□□□□ 0.57
Foxf1Q61080 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxf1Q61080 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxf1Q61080 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.61■□□□□ 0.57
Foxf1Q61080 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Foxf1Q61080 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxf1Q61080 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.61■□□□□ 0.57
Foxf1Q61080 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Foxf1Q61080 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxf1Q61080 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxf1Q61080 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Foxf1Q61080 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxf1Q61080 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxf1Q61080 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxf1Q61080 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxf1Q61080 Terc-201ENSMUST00000082862 423 ntBASIC18.6■□□□□ 0.57
Foxf1Q61080 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Foxf1Q61080 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Foxf1Q61080 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Foxf1Q61080 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxf1Q61080 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Foxf1Q61080 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxf1Q61080 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxf1Q61080 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Foxf1Q61080 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.58■□□□□ 0.57
Foxf1Q61080 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxf1Q61080 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Foxf1Q61080 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxf1Q61080 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Foxf1Q61080 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.57■□□□□ 0.56
Foxf1Q61080 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Foxf1Q61080 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxf1Q61080 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxf1Q61080 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Foxf1Q61080 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxf1Q61080 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxf1Q61080 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxf1Q61080 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
Foxf1Q61080 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Foxf1Q61080 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxf1Q61080 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxf1Q61080 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Foxf1Q61080 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxf1Q61080 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Foxf1Q61080 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxf1Q61080 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxf1Q61080 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxf1Q61080 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxf1Q61080 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.55■□□□□ 0.56
Foxf1Q61080 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxf1Q61080 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxf1Q61080 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxf1Q61080 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Foxf1Q61080 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxf1Q61080 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.54■□□□□ 0.56
Foxf1Q61080 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.54■□□□□ 0.56
Foxf1Q61080 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms