Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7d-4Q5R1H9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7d-4Q5R1H9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav7d-4Q5R1H9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7d-4Q5R1H9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7d-4Q5R1H9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7d-4Q5R1H9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7d-4Q5R1H9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7d-4Q5R1H9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7d-4Q5R1H9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7d-4Q5R1H9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav7d-4Q5R1H9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7d-4Q5R1H9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7d-4Q5R1H9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav7d-4Q5R1H9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7d-4Q5R1H9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Trav7d-4Q5R1H9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav7d-4Q5R1H9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7d-4Q5R1H9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7d-4Q5R1H9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7d-4Q5R1H9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7d-4Q5R1H9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7d-4Q5R1H9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7d-4Q5R1H9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7d-4Q5R1H9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7d-4Q5R1H9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7d-4Q5R1H9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav7d-4Q5R1H9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7d-4Q5R1H9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7d-4Q5R1H9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Trav7d-4Q5R1H9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav7d-4Q5R1H9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav7d-4Q5R1H9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7d-4Q5R1H9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav7d-4Q5R1H9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7d-4Q5R1H9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7d-4Q5R1H9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7d-4Q5R1H9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7d-4Q5R1H9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav7d-4Q5R1H9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav7d-4Q5R1H9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav7d-4Q5R1H9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Trav7d-4Q5R1H9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7d-4Q5R1H9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav7d-4Q5R1H9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7d-4Q5R1H9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav7d-4Q5R1H9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7d-4Q5R1H9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7d-4Q5R1H9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7d-4Q5R1H9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7d-4Q5R1H9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7d-4Q5R1H9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav7d-4Q5R1H9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7d-4Q5R1H9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Trav7d-4Q5R1H9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav7d-4Q5R1H9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav7d-4Q5R1H9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7d-4Q5R1H9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7d-4Q5R1H9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7d-4Q5R1H9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav7d-4Q5R1H9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7d-4Q5R1H9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7d-4Q5R1H9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
Trav7d-4Q5R1H9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7d-4Q5R1H9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7d-4Q5R1H9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7d-4Q5R1H9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav7d-4Q5R1H9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav7d-4Q5R1H9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7d-4Q5R1H9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav7d-4Q5R1H9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trav7d-4Q5R1H9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav7d-4Q5R1H9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav7d-4Q5R1H9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav7d-4Q5R1H9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Trav7d-4Q5R1H9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7d-4Q5R1H9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7d-4Q5R1H9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav7d-4Q5R1H9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7d-4Q5R1H9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav7d-4Q5R1H9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav7d-4Q5R1H9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Gm30023-201ENSMUST00000197970 889 ntBASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7d-4Q5R1H9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7d-4Q5R1H9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav7d-4Q5R1H9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7d-4Q5R1H9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav7d-4Q5R1H9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7d-4Q5R1H9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav7d-4Q5R1H9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav7d-4Q5R1H9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms