Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav5d-4Q5R1F6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav5d-4Q5R1F6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav5d-4Q5R1F6 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.1■□□□□ 0.65
Trav5d-4Q5R1F6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav5d-4Q5R1F6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav5d-4Q5R1F6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav5d-4Q5R1F6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav5d-4Q5R1F6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.09■□□□□ 0.65
Trav5d-4Q5R1F6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav5d-4Q5R1F6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav5d-4Q5R1F6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav5d-4Q5R1F6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trav5d-4Q5R1F6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav5d-4Q5R1F6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav5d-4Q5R1F6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.08■□□□□ 0.64
Trav5d-4Q5R1F6 Terc-201ENSMUST00000082862 423 ntBASIC19.08■□□□□ 0.64
Trav5d-4Q5R1F6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Trav5d-4Q5R1F6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav5d-4Q5R1F6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav5d-4Q5R1F6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Trav5d-4Q5R1F6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav5d-4Q5R1F6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trav5d-4Q5R1F6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trav5d-4Q5R1F6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav5d-4Q5R1F6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav5d-4Q5R1F6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav5d-4Q5R1F6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Gm6311-201ENSMUST00000073790 878 ntBASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Trav5d-4Q5R1F6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav5d-4Q5R1F6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.05■□□□□ 0.64
Trav5d-4Q5R1F6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav5d-4Q5R1F6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5d-4Q5R1F6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trav5d-4Q5R1F6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav5d-4Q5R1F6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav5d-4Q5R1F6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5d-4Q5R1F6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5d-4Q5R1F6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5d-4Q5R1F6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav5d-4Q5R1F6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav5d-4Q5R1F6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.02■□□□□ 0.64
Trav5d-4Q5R1F6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav5d-4Q5R1F6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav5d-4Q5R1F6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5d-4Q5R1F6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5d-4Q5R1F6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5d-4Q5R1F6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5d-4Q5R1F6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav5d-4Q5R1F6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav5d-4Q5R1F6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav5d-4Q5R1F6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav5d-4Q5R1F6 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.99■□□□□ 0.63
Trav5d-4Q5R1F6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav5d-4Q5R1F6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trav5d-4Q5R1F6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav5d-4Q5R1F6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav5d-4Q5R1F6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trav5d-4Q5R1F6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav5d-4Q5R1F6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav5d-4Q5R1F6 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.98■□□□□ 0.63
Trav5d-4Q5R1F6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5d-4Q5R1F6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5d-4Q5R1F6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav5d-4Q5R1F6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5d-4Q5R1F6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trav5d-4Q5R1F6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav5d-4Q5R1F6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav5d-4Q5R1F6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav5d-4Q5R1F6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav5d-4Q5R1F6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav5d-4Q5R1F6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav5d-4Q5R1F6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav5d-4Q5R1F6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav5d-4Q5R1F6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Trav5d-4Q5R1F6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav5d-4Q5R1F6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav5d-4Q5R1F6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav5d-4Q5R1F6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav5d-4Q5R1F6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav5d-4Q5R1F6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms