Protein–RNA interactions for Protein: Q5NC63

Gm12258, Predicted gene 12258, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12258Q5NC63 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm12258Q5NC63 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Gm12258Q5NC63 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm12258Q5NC63 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm12258Q5NC63 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm12258Q5NC63 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gm12258Q5NC63 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gm12258Q5NC63 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm12258Q5NC63 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.33■□□□□ 0.69
Gm12258Q5NC63 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.33■□□□□ 0.69
Gm12258Q5NC63 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Gm12258Q5NC63 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12258Q5NC63 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12258Q5NC63 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Gm12258Q5NC63 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm12258Q5NC63 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12258Q5NC63 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.31■□□□□ 0.68
Gm12258Q5NC63 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12258Q5NC63 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm12258Q5NC63 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12258Q5NC63 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12258Q5NC63 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12258Q5NC63 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.31■□□□□ 0.68
Gm12258Q5NC63 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm12258Q5NC63 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm12258Q5NC63 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.3■□□□□ 0.68
Gm12258Q5NC63 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm12258Q5NC63 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm12258Q5NC63 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm12258Q5NC63 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.29■□□□□ 0.68
Gm12258Q5NC63 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm12258Q5NC63 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Gm12258Q5NC63 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12258Q5NC63 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gm12258Q5NC63 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12258Q5NC63 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12258Q5NC63 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm12258Q5NC63 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm12258Q5NC63 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm12258Q5NC63 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm12258Q5NC63 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm12258Q5NC63 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm12258Q5NC63 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm12258Q5NC63 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm12258Q5NC63 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gm12258Q5NC63 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Gm12258Q5NC63 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm12258Q5NC63 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm12258Q5NC63 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm12258Q5NC63 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm12258Q5NC63 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm12258Q5NC63 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm12258Q5NC63 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm12258Q5NC63 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm12258Q5NC63 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gm12258Q5NC63 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm12258Q5NC63 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm12258Q5NC63 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm12258Q5NC63 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm12258Q5NC63 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm12258Q5NC63 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Gm12258Q5NC63 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Gm12258Q5NC63 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm12258Q5NC63 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm12258Q5NC63 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm12258Q5NC63 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gm12258Q5NC63 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm12258Q5NC63 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm12258Q5NC63 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.23■□□□□ 0.67
Gm12258Q5NC63 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm12258Q5NC63 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm12258Q5NC63 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm12258Q5NC63 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm12258Q5NC63 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm12258Q5NC63 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.22■□□□□ 0.67
Gm12258Q5NC63 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Gm12258Q5NC63 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm12258Q5NC63 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm12258Q5NC63 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm12258Q5NC63 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm12258Q5NC63 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm12258Q5NC63 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm12258Q5NC63 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm12258Q5NC63 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm12258Q5NC63 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm12258Q5NC63 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm12258Q5NC63 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.2■□□□□ 0.66
Gm12258Q5NC63 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm12258Q5NC63 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm12258Q5NC63 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm12258Q5NC63 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm12258Q5NC63 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm12258Q5NC63 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm12258Q5NC63 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm12258Q5NC63 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm12258Q5NC63 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm12258Q5NC63 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm12258Q5NC63 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm12258Q5NC63 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Gm12258Q5NC63 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms