Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cks1brtQ3UNC9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1brtQ3UNC9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1brtQ3UNC9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1brtQ3UNC9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1brtQ3UNC9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1brtQ3UNC9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1brtQ3UNC9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cks1brtQ3UNC9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1brtQ3UNC9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1brtQ3UNC9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1brtQ3UNC9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1brtQ3UNC9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1brtQ3UNC9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1brtQ3UNC9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1brtQ3UNC9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1brtQ3UNC9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cks1brtQ3UNC9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cks1brtQ3UNC9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cks1brtQ3UNC9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1brtQ3UNC9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1brtQ3UNC9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1brtQ3UNC9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1brtQ3UNC9 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.11■□□□□ 0.17
Cks1brtQ3UNC9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.11■□□□□ 0.17
Cks1brtQ3UNC9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1brtQ3UNC9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1brtQ3UNC9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1brtQ3UNC9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cks1brtQ3UNC9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cks1brtQ3UNC9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.1■□□□□ 0.17
Cks1brtQ3UNC9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1brtQ3UNC9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1brtQ3UNC9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1brtQ3UNC9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Cks1brtQ3UNC9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1brtQ3UNC9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1brtQ3UNC9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1brtQ3UNC9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cks1brtQ3UNC9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1brtQ3UNC9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Cks1brtQ3UNC9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cks1brtQ3UNC9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1brtQ3UNC9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cks1brtQ3UNC9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cks1brtQ3UNC9 Gm25262-201ENSMUST00000174934 133 ntBASIC16.08■□□□□ 0.16
Cks1brtQ3UNC9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1brtQ3UNC9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1brtQ3UNC9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1brtQ3UNC9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1brtQ3UNC9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.07■□□□□ 0.16
Cks1brtQ3UNC9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1brtQ3UNC9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cks1brtQ3UNC9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1brtQ3UNC9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1brtQ3UNC9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Cks1brtQ3UNC9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.06■□□□□ 0.16
Cks1brtQ3UNC9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1brtQ3UNC9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1brtQ3UNC9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1brtQ3UNC9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1brtQ3UNC9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1brtQ3UNC9 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.05■□□□□ 0.16
Cks1brtQ3UNC9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1brtQ3UNC9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1brtQ3UNC9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
Cks1brtQ3UNC9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.02■□□□□ 0.16
Cks1brtQ3UNC9 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.02■□□□□ 0.16
Cks1brtQ3UNC9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cks1brtQ3UNC9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cks1brtQ3UNC9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms