Protein–RNA interactions for Protein: Q3UA16

Spc25, Kinetochore protein Spc25, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spc25Q3UA16 Gm11599-201ENSMUST00000118720 878 ntBASIC20.3■□□□□ 0.84
Spc25Q3UA16 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spc25Q3UA16 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spc25Q3UA16 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spc25Q3UA16 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spc25Q3UA16 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Spc25Q3UA16 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spc25Q3UA16 Gm37136-201ENSMUST00000194368 194 ntBASIC20.29■□□□□ 0.84
Spc25Q3UA16 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spc25Q3UA16 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spc25Q3UA16 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spc25Q3UA16 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Spc25Q3UA16 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Spc25Q3UA16 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spc25Q3UA16 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.27■□□□□ 0.83
Spc25Q3UA16 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Spc25Q3UA16 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spc25Q3UA16 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spc25Q3UA16 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spc25Q3UA16 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spc25Q3UA16 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spc25Q3UA16 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spc25Q3UA16 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Spc25Q3UA16 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spc25Q3UA16 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spc25Q3UA16 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.24■□□□□ 0.83
Spc25Q3UA16 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.24■□□□□ 0.83
Spc25Q3UA16 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spc25Q3UA16 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spc25Q3UA16 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Spc25Q3UA16 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Spc25Q3UA16 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Spc25Q3UA16 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.22■□□□□ 0.83
Spc25Q3UA16 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Spc25Q3UA16 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Spc25Q3UA16 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spc25Q3UA16 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Spc25Q3UA16 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Spc25Q3UA16 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.2■□□□□ 0.82
Spc25Q3UA16 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Spc25Q3UA16 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spc25Q3UA16 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spc25Q3UA16 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Spc25Q3UA16 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spc25Q3UA16 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Spc25Q3UA16 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Spc25Q3UA16 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Spc25Q3UA16 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spc25Q3UA16 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spc25Q3UA16 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Spc25Q3UA16 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Spc25Q3UA16 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spc25Q3UA16 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Spc25Q3UA16 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spc25Q3UA16 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spc25Q3UA16 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spc25Q3UA16 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Spc25Q3UA16 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.16■□□□□ 0.82
Spc25Q3UA16 Gm4799-201ENSMUST00000095396 657 ntBASIC20.16■□□□□ 0.82
Spc25Q3UA16 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.16■□□□□ 0.82
Spc25Q3UA16 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spc25Q3UA16 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spc25Q3UA16 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spc25Q3UA16 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spc25Q3UA16 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.15■□□□□ 0.82
Spc25Q3UA16 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spc25Q3UA16 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spc25Q3UA16 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Spc25Q3UA16 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Spc25Q3UA16 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.14■□□□□ 0.81
Spc25Q3UA16 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Spc25Q3UA16 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Spc25Q3UA16 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.13■□□□□ 0.81
Spc25Q3UA16 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.13■□□□□ 0.81
Spc25Q3UA16 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Spc25Q3UA16 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.12■□□□□ 0.81
Spc25Q3UA16 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spc25Q3UA16 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spc25Q3UA16 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spc25Q3UA16 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spc25Q3UA16 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spc25Q3UA16 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Spc25Q3UA16 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spc25Q3UA16 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.11■□□□□ 0.81
Spc25Q3UA16 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Spc25Q3UA16 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Spc25Q3UA16 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.1■□□□□ 0.81
Spc25Q3UA16 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Spc25Q3UA16 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Spc25Q3UA16 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.1■□□□□ 0.81
Spc25Q3UA16 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.1■□□□□ 0.81
Spc25Q3UA16 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms