Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fndc4Q3TR08 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fndc4Q3TR08 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Fndc4Q3TR08 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Fndc4Q3TR08 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fndc4Q3TR08 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fndc4Q3TR08 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fndc4Q3TR08 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fndc4Q3TR08 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fndc4Q3TR08 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fndc4Q3TR08 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Fndc4Q3TR08 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Fndc4Q3TR08 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.83■□□□□ 0.6
Fndc4Q3TR08 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Fndc4Q3TR08 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fndc4Q3TR08 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fndc4Q3TR08 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc4Q3TR08 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.82■□□□□ 0.6
Fndc4Q3TR08 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc4Q3TR08 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.82■□□□□ 0.6
Fndc4Q3TR08 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Fndc4Q3TR08 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc4Q3TR08 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Fndc4Q3TR08 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc4Q3TR08 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Fndc4Q3TR08 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.8■□□□□ 0.6
Fndc4Q3TR08 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.8■□□□□ 0.6
Fndc4Q3TR08 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
Fndc4Q3TR08 Gm37136-201ENSMUST00000194368 194 ntBASIC18.8■□□□□ 0.6
Fndc4Q3TR08 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.8■□□□□ 0.6
Fndc4Q3TR08 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc4Q3TR08 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc4Q3TR08 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc4Q3TR08 Gm7432-201ENSMUST00000210343 879 ntBASIC18.78■□□□□ 0.6
Fndc4Q3TR08 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.78■□□□□ 0.6
Fndc4Q3TR08 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc4Q3TR08 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc4Q3TR08 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc4Q3TR08 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc4Q3TR08 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc4Q3TR08 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fndc4Q3TR08 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fndc4Q3TR08 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Fndc4Q3TR08 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fndc4Q3TR08 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fndc4Q3TR08 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fndc4Q3TR08 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fndc4Q3TR08 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fndc4Q3TR08 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fndc4Q3TR08 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Fndc4Q3TR08 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fndc4Q3TR08 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fndc4Q3TR08 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fndc4Q3TR08 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fndc4Q3TR08 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Fndc4Q3TR08 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fndc4Q3TR08 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.72■□□□□ 0.59
Fndc4Q3TR08 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.72■□□□□ 0.59
Fndc4Q3TR08 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fndc4Q3TR08 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fndc4Q3TR08 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fndc4Q3TR08 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms