Protein–RNA interactions for Protein: P97742

Cpt1a, Carnitine O-palmitoyltransferase 1, liver isoform, mousemouse

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1aP97742 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cpt1aP97742 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cpt1aP97742 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cpt1aP97742 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.78■■□□□ 1.08
Cpt1aP97742 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpt1aP97742 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.78■■□□□ 1.08
Cpt1aP97742 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpt1aP97742 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cpt1aP97742 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpt1aP97742 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cpt1aP97742 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpt1aP97742 Gm7332-201ENSMUST00000118351 454 ntBASIC21.77■■□□□ 1.08
Cpt1aP97742 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpt1aP97742 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpt1aP97742 Gm44428-201ENSMUST00000204474 874 ntBASIC21.76■■□□□ 1.07
Cpt1aP97742 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Cpt1aP97742 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cpt1aP97742 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpt1aP97742 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Cpt1aP97742 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cpt1aP97742 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.74■■□□□ 1.07
Cpt1aP97742 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.74■■□□□ 1.07
Cpt1aP97742 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cpt1aP97742 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cpt1aP97742 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cpt1aP97742 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cpt1aP97742 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cpt1aP97742 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.73■■□□□ 1.07
Cpt1aP97742 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpt1aP97742 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cpt1aP97742 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
Cpt1aP97742 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cpt1aP97742 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cpt1aP97742 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.72■■□□□ 1.07
Cpt1aP97742 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cpt1aP97742 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpt1aP97742 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Cpt1aP97742 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpt1aP97742 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.71■■□□□ 1.07
Cpt1aP97742 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cpt1aP97742 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.7■■□□□ 1.06
Cpt1aP97742 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpt1aP97742 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpt1aP97742 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Cpt1aP97742 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cpt1aP97742 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpt1aP97742 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpt1aP97742 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cpt1aP97742 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpt1aP97742 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpt1aP97742 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpt1aP97742 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpt1aP97742 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cpt1aP97742 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.67■■□□□ 1.06
Cpt1aP97742 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.67■■□□□ 1.06
Cpt1aP97742 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpt1aP97742 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpt1aP97742 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpt1aP97742 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpt1aP97742 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.66■■□□□ 1.06
Cpt1aP97742 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpt1aP97742 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpt1aP97742 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpt1aP97742 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpt1aP97742 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.65■■□□□ 1.06
Cpt1aP97742 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpt1aP97742 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.65■■□□□ 1.06
Cpt1aP97742 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpt1aP97742 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpt1aP97742 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpt1aP97742 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpt1aP97742 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cpt1aP97742 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpt1aP97742 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.63■■□□□ 1.05
Cpt1aP97742 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cpt1aP97742 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.63■■□□□ 1.05
Cpt1aP97742 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpt1aP97742 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpt1aP97742 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpt1aP97742 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpt1aP97742 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpt1aP97742 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpt1aP97742 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpt1aP97742 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpt1aP97742 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpt1aP97742 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpt1aP97742 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cpt1aP97742 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpt1aP97742 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpt1aP97742 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpt1aP97742 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cpt1aP97742 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.59■■□□□ 1.05
Cpt1aP97742 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpt1aP97742 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpt1aP97742 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpt1aP97742 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpt1aP97742 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpt1aP97742 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpt1aP97742 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpt1aP97742 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms