Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1bP61025 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1bP61025 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1bP61025 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cks1bP61025 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1bP61025 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cks1bP61025 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1bP61025 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cks1bP61025 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cks1bP61025 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cks1bP61025 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cks1bP61025 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cks1bP61025 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cks1bP61025 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cks1bP61025 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cks1bP61025 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cks1bP61025 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Cks1bP61025 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cks1bP61025 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.72■□□□□ 0.11
Cks1bP61025 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cks1bP61025 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cks1bP61025 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks1bP61025 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks1bP61025 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.71■□□□□ 0.11
Cks1bP61025 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks1bP61025 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.71■□□□□ 0.11
Cks1bP61025 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cks1bP61025 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cks1bP61025 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cks1bP61025 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Cks1bP61025 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
Cks1bP61025 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1bP61025 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cks1bP61025 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1bP61025 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.7■□□□□ 0.1
Cks1bP61025 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1bP61025 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks1bP61025 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1bP61025 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1bP61025 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1bP61025 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks1bP61025 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1bP61025 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cks1bP61025 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1bP61025 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1bP61025 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.68■□□□□ 0.1
Cks1bP61025 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1bP61025 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks1bP61025 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.67■□□□□ 0.1
Cks1bP61025 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1bP61025 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1bP61025 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1bP61025 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1bP61025 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cks1bP61025 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cks1bP61025 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Cks1bP61025 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.65■□□□□ 0.1
Cks1bP61025 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.65■□□□□ 0.1
Cks1bP61025 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cks1bP61025 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cks1bP61025 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1bP61025 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.64■□□□□ 0.09
Cks1bP61025 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cks1bP61025 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cks1bP61025 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cks1bP61025 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cks1bP61025 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1bP61025 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1bP61025 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.63■□□□□ 0.09
Cks1bP61025 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1bP61025 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1bP61025 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1bP61025 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1bP61025 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cks1bP61025 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cks1bP61025 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cks1bP61025 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cks1bP61025 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.62■□□□□ 0.09
Cks1bP61025 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.62■□□□□ 0.09
Cks1bP61025 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.61■□□□□ 0.09
Cks1bP61025 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Cks1bP61025 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cks1bP61025 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cks1bP61025 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms