Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Hmgcs2P54869 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.27■■□□□ 1.64
Hmgcs2P54869 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Hmgcs2P54869 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Hmgcs2P54869 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.25■■□□□ 1.63
Hmgcs2P54869 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.25■■□□□ 1.63
Hmgcs2P54869 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hmgcs2P54869 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hmgcs2P54869 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Hmgcs2P54869 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hmgcs2P54869 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hmgcs2P54869 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hmgcs2P54869 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.23■■□□□ 1.63
Hmgcs2P54869 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Hmgcs2P54869 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Hmgcs2P54869 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Hmgcs2P54869 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Hmgcs2P54869 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Hmgcs2P54869 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Hmgcs2P54869 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Hmgcs2P54869 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Hmgcs2P54869 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Hmgcs2P54869 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Hmgcs2P54869 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.2■■□□□ 1.63
Hmgcs2P54869 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
Hmgcs2P54869 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.2■■□□□ 1.63
Hmgcs2P54869 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Hmgcs2P54869 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Hmgcs2P54869 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
Hmgcs2P54869 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Hmgcs2P54869 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Hmgcs2P54869 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Hmgcs2P54869 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.19■■□□□ 1.62
Hmgcs2P54869 Gm45102-201ENSMUST00000207427 857 ntBASIC25.19■■□□□ 1.62
Hmgcs2P54869 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Hmgcs2P54869 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Hmgcs2P54869 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Hmgcs2P54869 Gm14117-201ENSMUST00000122417 843 ntBASIC25.18■■□□□ 1.62
Hmgcs2P54869 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Hmgcs2P54869 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Hmgcs2P54869 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Hmgcs2P54869 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Hmgcs2P54869 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.17■■□□□ 1.62
Hmgcs2P54869 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.17■■□□□ 1.62
Hmgcs2P54869 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Hmgcs2P54869 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.17■■□□□ 1.62
Hmgcs2P54869 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Hmgcs2P54869 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Hmgcs2P54869 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.16■■□□□ 1.62
Hmgcs2P54869 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.16■■□□□ 1.62
Hmgcs2P54869 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Hmgcs2P54869 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Hmgcs2P54869 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Hmgcs2P54869 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Hmgcs2P54869 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Hmgcs2P54869 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Hmgcs2P54869 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Hmgcs2P54869 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Hmgcs2P54869 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Hmgcs2P54869 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Hmgcs2P54869 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Hmgcs2P54869 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.13■■□□□ 1.61
Hmgcs2P54869 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Hmgcs2P54869 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.13■■□□□ 1.61
Hmgcs2P54869 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hmgcs2P54869 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hmgcs2P54869 Gm9959-201ENSMUST00000068277 390 ntBASIC25.12■■□□□ 1.61
Hmgcs2P54869 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hmgcs2P54869 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hmgcs2P54869 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hmgcs2P54869 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Hmgcs2P54869 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
Hmgcs2P54869 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.11■■□□□ 1.61
Hmgcs2P54869 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Hmgcs2P54869 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Hmgcs2P54869 Gm7199-201ENSMUST00000118327 1485 ntBASIC25.1■■□□□ 1.61
Hmgcs2P54869 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Hmgcs2P54869 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Hmgcs2P54869 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Hmgcs2P54869 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Hmgcs2P54869 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Hmgcs2P54869 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Hmgcs2P54869 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Hmgcs2P54869 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Hmgcs2P54869 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Hmgcs2P54869 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Hmgcs2P54869 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.07■■□□□ 1.6
Hmgcs2P54869 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hmgcs2P54869 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hmgcs2P54869 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.07■■□□□ 1.6
Hmgcs2P54869 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Hmgcs2P54869 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Hmgcs2P54869 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Hmgcs2P54869 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.06■■□□□ 1.6
Hmgcs2P54869 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.06■■□□□ 1.6
Hmgcs2P54869 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hmgcs2P54869 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Hmgcs2P54869 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.05■■□□□ 1.6
Hmgcs2P54869 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Hmgcs2P54869 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms