Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.94■■□□□ 1.42
Nub1P54729 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nub1P54729 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nub1P54729 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nub1P54729 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.93■■□□□ 1.42
Nub1P54729 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.93■■□□□ 1.42
Nub1P54729 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nub1P54729 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nub1P54729 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Nub1P54729 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nub1P54729 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Nub1P54729 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nub1P54729 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Nub1P54729 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Nub1P54729 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Nub1P54729 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Nub1P54729 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Nub1P54729 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.91■■□□□ 1.42
Nub1P54729 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Nub1P54729 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Nub1P54729 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nub1P54729 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nub1P54729 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Nub1P54729 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Nub1P54729 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Nub1P54729 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.89■■□□□ 1.42
Nub1P54729 Mir6538-201ENSMUST00000183713 110 ntBASIC23.89■■□□□ 1.41
Nub1P54729 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Nub1P54729 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Nub1P54729 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
Nub1P54729 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Nub1P54729 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Nub1P54729 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Nub1P54729 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nub1P54729 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nub1P54729 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.87■■□□□ 1.41
Nub1P54729 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
Nub1P54729 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.87■■□□□ 1.41
Nub1P54729 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.87■■□□□ 1.41
Nub1P54729 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Nub1P54729 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nub1P54729 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nub1P54729 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nub1P54729 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Nub1P54729 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nub1P54729 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nub1P54729 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Nub1P54729 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Nub1P54729 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Nub1P54729 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.84■■□□□ 1.41
Nub1P54729 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nub1P54729 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nub1P54729 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.83■■□□□ 1.41
Nub1P54729 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Nub1P54729 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.83■■□□□ 1.41
Nub1P54729 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.82■■□□□ 1.4
Nub1P54729 Gm27502-201ENSMUST00000183495 199 ntBASIC23.82■■□□□ 1.4
Nub1P54729 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.82■■□□□ 1.4
Nub1P54729 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nub1P54729 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nub1P54729 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Nub1P54729 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Nub1P54729 Gm44428-201ENSMUST00000204474 874 ntBASIC23.81■■□□□ 1.4
Nub1P54729 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Nub1P54729 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nub1P54729 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nub1P54729 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nub1P54729 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nub1P54729 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nub1P54729 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nub1P54729 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nub1P54729 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.8■■□□□ 1.4
Nub1P54729 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nub1P54729 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Nub1P54729 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nub1P54729 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.79■■□□□ 1.4
Nub1P54729 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.78■■□□□ 1.4
Nub1P54729 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nub1P54729 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nub1P54729 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nub1P54729 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nub1P54729 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nub1P54729 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nub1P54729 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.77■■□□□ 1.4
Nub1P54729 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nub1P54729 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nub1P54729 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Nub1P54729 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Nub1P54729 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nub1P54729 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nub1P54729 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.75■■□□□ 1.39
Nub1P54729 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Nub1P54729 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.75■■□□□ 1.39
Nub1P54729 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.75■■□□□ 1.39
Nub1P54729 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nub1P54729 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nub1P54729 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.74■■□□□ 1.39
Nub1P54729 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nub1P54729 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nub1P54729 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms