Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Msh6P54276 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Msh6P54276 Gm45444-201ENSMUST00000211394 898 ntBASIC28.9■■■□□ 2.22
Msh6P54276 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.9■■■□□ 2.22
Msh6P54276 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Msh6P54276 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Msh6P54276 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Msh6P54276 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Msh6P54276 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC28.89■■■□□ 2.22
Msh6P54276 Rps24-207ENSMUST00000224568 714 ntBASIC28.88■■■□□ 2.21
Msh6P54276 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Msh6P54276 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.88■■■□□ 2.21
Msh6P54276 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Msh6P54276 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.88■■■□□ 2.21
Msh6P54276 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Msh6P54276 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Msh6P54276 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Msh6P54276 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Msh6P54276 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Msh6P54276 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Msh6P54276 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Msh6P54276 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
Msh6P54276 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC28.85■■■□□ 2.21
Msh6P54276 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Msh6P54276 Gm15820-201ENSMUST00000201566 728 ntBASIC28.85■■■□□ 2.21
Msh6P54276 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Msh6P54276 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Msh6P54276 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Msh6P54276 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Msh6P54276 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Msh6P54276 Gm45102-201ENSMUST00000207427 857 ntBASIC28.82■■■□□ 2.2
Msh6P54276 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC28.81■■■□□ 2.2
Msh6P54276 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.81■■■□□ 2.2
Msh6P54276 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Msh6P54276 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC28.81■■■□□ 2.2
Msh6P54276 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
Msh6P54276 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Msh6P54276 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Msh6P54276 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Msh6P54276 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Msh6P54276 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Msh6P54276 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.79■■■□□ 2.2
Msh6P54276 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Msh6P54276 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Msh6P54276 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Msh6P54276 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.78■■■□□ 2.2
Msh6P54276 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
Msh6P54276 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Msh6P54276 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
Msh6P54276 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.77■■■□□ 2.2
Msh6P54276 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Msh6P54276 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.77■■■□□ 2.2
Msh6P54276 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Msh6P54276 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC28.76■■■□□ 2.2
Msh6P54276 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Msh6P54276 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Msh6P54276 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Msh6P54276 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Msh6P54276 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Msh6P54276 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Msh6P54276 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
Msh6P54276 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Msh6P54276 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Msh6P54276 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Msh6P54276 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.74■■■□□ 2.19
Msh6P54276 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Msh6P54276 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Msh6P54276 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Msh6P54276 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
Msh6P54276 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Msh6P54276 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.72■■■□□ 2.19
Msh6P54276 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC28.72■■■□□ 2.19
Msh6P54276 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Msh6P54276 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Msh6P54276 Gm14117-201ENSMUST00000122417 843 ntBASIC28.71■■■□□ 2.19
Msh6P54276 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Msh6P54276 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Msh6P54276 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Msh6P54276 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
Msh6P54276 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Msh6P54276 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Msh6P54276 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Msh6P54276 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Msh6P54276 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Msh6P54276 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Msh6P54276 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Msh6P54276 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.67■■■□□ 2.18
Msh6P54276 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Msh6P54276 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
Msh6P54276 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Msh6P54276 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC28.66■■■□□ 2.18
Msh6P54276 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC28.65■■■□□ 2.18
Msh6P54276 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Msh6P54276 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Msh6P54276 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Msh6P54276 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
Msh6P54276 AC164433.2-201ENSMUST00000226346 1701 ntBASIC28.64■■■□□ 2.18
Msh6P54276 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.64■■■□□ 2.18
Msh6P54276 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.64■■■□□ 2.17
Msh6P54276 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC28.63■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms