Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cdh4P39038 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.28■■□□□ 1
Cdh4P39038 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh4P39038 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh4P39038 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cdh4P39038 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.26■□□□□ 0.99
Cdh4P39038 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.26■□□□□ 0.99
Cdh4P39038 Gm12366-201ENSMUST00000121722 873 ntBASIC21.26■□□□□ 0.99
Cdh4P39038 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.26■□□□□ 0.99
Cdh4P39038 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.26■□□□□ 0.99
Cdh4P39038 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.26■□□□□ 0.99
Cdh4P39038 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.26■□□□□ 0.99
Cdh4P39038 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh4P39038 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.26■□□□□ 0.99
Cdh4P39038 Gm5786-201ENSMUST00000085368 882 ntBASIC21.26■□□□□ 0.99
Cdh4P39038 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh4P39038 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh4P39038 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh4P39038 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh4P39038 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh4P39038 Cap2-205ENSMUST00000225824 1634 ntBASIC21.25■□□□□ 0.99
Cdh4P39038 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh4P39038 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.25■□□□□ 0.99
Cdh4P39038 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.24■□□□□ 0.99
Cdh4P39038 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh4P39038 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh4P39038 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh4P39038 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh4P39038 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.24■□□□□ 0.99
Cdh4P39038 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh4P39038 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh4P39038 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cdh4P39038 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh4P39038 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh4P39038 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cdh4P39038 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh4P39038 Gm14523-201ENSMUST00000117260 558 ntBASIC21.23■□□□□ 0.99
Cdh4P39038 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh4P39038 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh4P39038 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh4P39038 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh4P39038 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdh4P39038 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh4P39038 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.22■□□□□ 0.99
Cdh4P39038 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh4P39038 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh4P39038 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh4P39038 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cdh4P39038 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh4P39038 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cdh4P39038 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh4P39038 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh4P39038 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh4P39038 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh4P39038 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh4P39038 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh4P39038 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh4P39038 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh4P39038 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cdh4P39038 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh4P39038 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh4P39038 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh4P39038 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh4P39038 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh4P39038 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdh4P39038 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh4P39038 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh4P39038 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdh4P39038 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh4P39038 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cdh4P39038 Gm7332-201ENSMUST00000118351 454 ntBASIC21.18■□□□□ 0.98
Cdh4P39038 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdh4P39038 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh4P39038 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh4P39038 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdh4P39038 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh4P39038 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh4P39038 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh4P39038 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.17■□□□□ 0.98
Cdh4P39038 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdh4P39038 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh4P39038 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh4P39038 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh4P39038 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh4P39038 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.15■□□□□ 0.98
Cdh4P39038 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh4P39038 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.15■□□□□ 0.98
Cdh4P39038 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh4P39038 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh4P39038 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdh4P39038 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cdh4P39038 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdh4P39038 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.14■□□□□ 0.97
Cdh4P39038 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh4P39038 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh4P39038 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh4P39038 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh4P39038 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.13■□□□□ 0.97
Cdh4P39038 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh4P39038 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms