Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh3P10287 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh3P10287 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.4■□□□□ 0.86
Cdh3P10287 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cdh3P10287 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdh3P10287 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.39■□□□□ 0.85
Cdh3P10287 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh3P10287 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh3P10287 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh3P10287 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh3P10287 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh3P10287 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh3P10287 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh3P10287 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdh3P10287 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh3P10287 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh3P10287 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh3P10287 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cdh3P10287 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh3P10287 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh3P10287 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh3P10287 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh3P10287 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh3P10287 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh3P10287 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh3P10287 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh3P10287 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh3P10287 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh3P10287 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh3P10287 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh3P10287 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh3P10287 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.33■□□□□ 0.85
Cdh3P10287 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh3P10287 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Cdh3P10287 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cdh3P10287 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cdh3P10287 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.32■□□□□ 0.84
Cdh3P10287 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh3P10287 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh3P10287 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cdh3P10287 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh3P10287 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cdh3P10287 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cdh3P10287 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh3P10287 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh3P10287 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh3P10287 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Cdh3P10287 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh3P10287 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cdh3P10287 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.31■□□□□ 0.84
Cdh3P10287 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.3■□□□□ 0.84
Cdh3P10287 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh3P10287 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh3P10287 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh3P10287 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh3P10287 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh3P10287 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh3P10287 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.29■□□□□ 0.84
Cdh3P10287 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cdh3P10287 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh3P10287 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh3P10287 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh3P10287 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh3P10287 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh3P10287 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh3P10287 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh3P10287 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cdh3P10287 Gm4799-201ENSMUST00000095396 657 ntBASIC20.27■□□□□ 0.84
Cdh3P10287 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh3P10287 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh3P10287 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh3P10287 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh3P10287 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cdh3P10287 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Cdh3P10287 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cdh3P10287 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh3P10287 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh3P10287 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh3P10287 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh3P10287 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh3P10287 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Cdh3P10287 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh3P10287 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.25■□□□□ 0.83
Cdh3P10287 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh3P10287 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh3P10287 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh3P10287 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.24■□□□□ 0.83
Cdh3P10287 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh3P10287 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh3P10287 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cdh3P10287 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdh3P10287 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh3P10287 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh3P10287 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh3P10287 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Cdh3P10287 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh3P10287 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh3P10287 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh3P10287 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.22■□□□□ 0.83
Cdh3P10287 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms