Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PtcraP0C6B2 Gm16437-201ENSMUST00000025669 507 ntBASIC19.4■□□□□ 0.7
PtcraP0C6B2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PtcraP0C6B2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PtcraP0C6B2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PtcraP0C6B2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PtcraP0C6B2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PtcraP0C6B2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PtcraP0C6B2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PtcraP0C6B2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.37■□□□□ 0.69
PtcraP0C6B2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtcraP0C6B2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PtcraP0C6B2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtcraP0C6B2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PtcraP0C6B2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PtcraP0C6B2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PtcraP0C6B2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PtcraP0C6B2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PtcraP0C6B2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.35■□□□□ 0.69
PtcraP0C6B2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.35■□□□□ 0.69
PtcraP0C6B2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.35■□□□□ 0.69
PtcraP0C6B2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PtcraP0C6B2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PtcraP0C6B2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PtcraP0C6B2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PtcraP0C6B2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PtcraP0C6B2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PtcraP0C6B2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.33■□□□□ 0.68
PtcraP0C6B2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PtcraP0C6B2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PtcraP0C6B2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PtcraP0C6B2 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.32■□□□□ 0.68
PtcraP0C6B2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PtcraP0C6B2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.31■□□□□ 0.68
PtcraP0C6B2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.31■□□□□ 0.68
PtcraP0C6B2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
PtcraP0C6B2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtcraP0C6B2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtcraP0C6B2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PtcraP0C6B2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtcraP0C6B2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.3■□□□□ 0.68
PtcraP0C6B2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtcraP0C6B2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtcraP0C6B2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtcraP0C6B2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
PtcraP0C6B2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtcraP0C6B2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtcraP0C6B2 Gm11175-201ENSMUST00000116172 543 ntBASIC19.29■□□□□ 0.68
PtcraP0C6B2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PtcraP0C6B2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtcraP0C6B2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtcraP0C6B2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtcraP0C6B2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PtcraP0C6B2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PtcraP0C6B2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.28■□□□□ 0.68
PtcraP0C6B2 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.28■□□□□ 0.68
PtcraP0C6B2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PtcraP0C6B2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.28■□□□□ 0.68
PtcraP0C6B2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PtcraP0C6B2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PtcraP0C6B2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PtcraP0C6B2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PtcraP0C6B2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PtcraP0C6B2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PtcraP0C6B2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtcraP0C6B2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtcraP0C6B2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtcraP0C6B2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtcraP0C6B2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PtcraP0C6B2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtcraP0C6B2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PtcraP0C6B2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PtcraP0C6B2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtcraP0C6B2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PtcraP0C6B2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PtcraP0C6B2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtcraP0C6B2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PtcraP0C6B2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtcraP0C6B2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PtcraP0C6B2 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.23■□□□□ 0.67
PtcraP0C6B2 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.23■□□□□ 0.67
PtcraP0C6B2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtcraP0C6B2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PtcraP0C6B2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtcraP0C6B2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PtcraP0C6B2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtcraP0C6B2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtcraP0C6B2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.22■□□□□ 0.67
PtcraP0C6B2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PtcraP0C6B2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtcraP0C6B2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PtcraP0C6B2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms