Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.93■□□□□ 0.78
P06344 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P06344 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P06344 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.91■□□□□ 0.78
P06344 Gm44428-201ENSMUST00000204474 874 ntBASIC19.91■□□□□ 0.78
P06344 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
P06344 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P06344 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P06344 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
P06344 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
P06344 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P06344 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
P06344 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
P06344 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
P06344 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P06344 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P06344 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
P06344 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P06344 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P06344 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
P06344 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P06344 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P06344 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P06344 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P06344 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.87■□□□□ 0.77
P06344 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.87■□□□□ 0.77
P06344 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
P06344 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.87■□□□□ 0.77
P06344 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
P06344 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
P06344 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
P06344 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
P06344 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P06344 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
P06344 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P06344 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
P06344 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P06344 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
P06344 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.85■□□□□ 0.77
P06344 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.85■□□□□ 0.77
P06344 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.85■□□□□ 0.77
P06344 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P06344 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
P06344 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
P06344 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
P06344 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P06344 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P06344 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
P06344 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.84■□□□□ 0.77
P06344 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P06344 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.83■□□□□ 0.77
P06344 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
P06344 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
P06344 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.82■□□□□ 0.76
P06344 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P06344 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P06344 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.81■□□□□ 0.76
P06344 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P06344 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
P06344 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
P06344 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
P06344 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.8■□□□□ 0.76
P06344 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
P06344 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
P06344 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P06344 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
P06344 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P06344 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
P06344 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
P06344 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
P06344 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.78■□□□□ 0.76
P06344 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
P06344 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P06344 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
P06344 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
P06344 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P06344 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
P06344 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
P06344 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P06344 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P06344 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
P06344 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.77■□□□□ 0.76
P06344 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.76■□□□□ 0.75
P06344 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
P06344 Gm10420-201ENSMUST00000121713 882 ntBASIC19.76■□□□□ 0.75
P06344 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
P06344 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P06344 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
P06344 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P06344 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
P06344 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P06344 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P06344 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.74■□□□□ 0.75
P06344 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P06344 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.74■□□□□ 0.75
P06344 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
P06344 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.74■□□□□ 0.75
P06344 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P06344 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.73■□□□□ 0.75
P06344 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms