Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt1P04104 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.17■□□□□ 0.98
Krt1P04104 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Krt1P04104 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt1P04104 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt1P04104 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt1P04104 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt1P04104 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt1P04104 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt1P04104 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt1P04104 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt1P04104 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Krt1P04104 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Krt1P04104 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.13■□□□□ 0.97
Krt1P04104 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt1P04104 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt1P04104 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt1P04104 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt1P04104 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Krt1P04104 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Krt1P04104 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Krt1P04104 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt1P04104 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Krt1P04104 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Krt1P04104 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt1P04104 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Krt1P04104 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.11■□□□□ 0.97
Krt1P04104 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Krt1P04104 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt1P04104 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Krt1P04104 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.1■□□□□ 0.97
Krt1P04104 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt1P04104 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt1P04104 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.09■□□□□ 0.97
Krt1P04104 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt1P04104 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt1P04104 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Krt1P04104 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.09■□□□□ 0.97
Krt1P04104 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Krt1P04104 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Krt1P04104 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Krt1P04104 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Krt1P04104 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Krt1P04104 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt1P04104 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.07■□□□□ 0.96
Krt1P04104 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Krt1P04104 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.07■□□□□ 0.96
Krt1P04104 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt1P04104 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt1P04104 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt1P04104 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Krt1P04104 Gm30023-201ENSMUST00000197970 889 ntBASIC21.06■□□□□ 0.96
Krt1P04104 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Krt1P04104 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Krt1P04104 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt1P04104 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Krt1P04104 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt1P04104 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt1P04104 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt1P04104 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Krt1P04104 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt1P04104 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt1P04104 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Krt1P04104 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.04■□□□□ 0.96
Krt1P04104 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Krt1P04104 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Krt1P04104 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Krt1P04104 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Krt1P04104 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt1P04104 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt1P04104 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt1P04104 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt1P04104 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt1P04104 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.03■□□□□ 0.96
Krt1P04104 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Krt1P04104 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Krt1P04104 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Krt1P04104 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Krt1P04104 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt1P04104 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Krt1P04104 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Krt1P04104 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Krt1P04104 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Krt1P04104 Gm14121-201ENSMUST00000121441 1380 ntBASIC21■□□□□ 0.95
Krt1P04104 Gm4419-202ENSMUST00000226239 1431 ntBASIC21■□□□□ 0.95
Krt1P04104 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Krt1P04104 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Krt1P04104 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Krt1P04104 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.99■□□□□ 0.95
Krt1P04104 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Krt1P04104 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Krt1P04104 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt1P04104 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Krt1P04104 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt1P04104 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt1P04104 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Krt1P04104 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.98■□□□□ 0.95
Krt1P04104 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Krt1P04104 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Krt1P04104 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms