Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.57■□□□□ 0.4
P01788 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P01788 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
P01788 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.57■□□□□ 0.4
P01788 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01788 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.57■□□□□ 0.4
P01788 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P01788 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01788 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01788 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01788 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01788 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01788 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01788 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.56■□□□□ 0.4
P01788 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
P01788 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01788 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.55■□□□□ 0.4
P01788 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.55■□□□□ 0.4
P01788 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01788 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01788 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
P01788 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01788 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01788 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
P01788 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P01788 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01788 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01788 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01788 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
P01788 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01788 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01788 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P01788 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01788 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01788 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01788 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.52■□□□□ 0.4
P01788 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01788 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01788 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01788 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P01788 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.51■□□□□ 0.39
P01788 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.51■□□□□ 0.39
P01788 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01788 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01788 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P01788 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01788 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.51■□□□□ 0.39
P01788 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01788 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01788 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P01788 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01788 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.5■□□□□ 0.39
P01788 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01788 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
P01788 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P01788 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
P01788 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.5■□□□□ 0.39
P01788 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
P01788 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
P01788 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
P01788 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.49■□□□□ 0.39
P01788 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01788 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P01788 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.48■□□□□ 0.39
P01788 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P01788 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P01788 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P01788 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P01788 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01788 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.47■□□□□ 0.39
P01788 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
P01788 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01788 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P01788 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P01788 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P01788 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.46■□□□□ 0.39
P01788 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P01788 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P01788 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P01788 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.46■□□□□ 0.39
P01788 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.45■□□□□ 0.38
P01788 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.45■□□□□ 0.38
P01788 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.45■□□□□ 0.38
P01788 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P01788 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P01788 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P01788 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01788 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01788 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P01788 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
P01788 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P01788 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms