Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hcn3O88705 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hcn3O88705 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Hcn3O88705 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hcn3O88705 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Hcn3O88705 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hcn3O88705 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hcn3O88705 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hcn3O88705 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hcn3O88705 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Hcn3O88705 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hcn3O88705 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Hcn3O88705 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hcn3O88705 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Hcn3O88705 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn3O88705 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn3O88705 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.35■■□□□ 1.01
Hcn3O88705 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn3O88705 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn3O88705 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn3O88705 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn3O88705 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Hcn3O88705 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Hcn3O88705 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Hcn3O88705 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Hcn3O88705 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hcn3O88705 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.33■■□□□ 1.01
Hcn3O88705 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hcn3O88705 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Hcn3O88705 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.32■■□□□ 1
Hcn3O88705 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn3O88705 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn3O88705 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn3O88705 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.32■■□□□ 1
Hcn3O88705 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn3O88705 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Hcn3O88705 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Hcn3O88705 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hcn3O88705 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Hcn3O88705 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hcn3O88705 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn3O88705 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hcn3O88705 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn3O88705 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn3O88705 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Hcn3O88705 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn3O88705 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hcn3O88705 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.28■■□□□ 1
Hcn3O88705 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Hcn3O88705 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hcn3O88705 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.27■■□□□ 1
Hcn3O88705 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hcn3O88705 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
Hcn3O88705 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.27■■□□□ 1
Hcn3O88705 Nkain2-201ENSMUST00000092602 558 ntBASIC21.27■■□□□ 1
Hcn3O88705 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hcn3O88705 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hcn3O88705 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hcn3O88705 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.26■□□□□ 0.99
Hcn3O88705 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcn3O88705 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcn3O88705 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.26■□□□□ 0.99
Hcn3O88705 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcn3O88705 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hcn3O88705 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Hcn3O88705 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Hcn3O88705 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hcn3O88705 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hcn3O88705 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn3O88705 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Hcn3O88705 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.24■□□□□ 0.99
Hcn3O88705 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn3O88705 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn3O88705 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Hcn3O88705 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Hcn3O88705 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn3O88705 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.24■□□□□ 0.99
Hcn3O88705 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Hcn3O88705 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hcn3O88705 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hcn3O88705 Gm6821-201ENSMUST00000107540 542 ntBASIC21.23■□□□□ 0.99
Hcn3O88705 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hcn3O88705 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hcn3O88705 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hcn3O88705 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Hcn3O88705 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.22■□□□□ 0.99
Hcn3O88705 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcn3O88705 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Hcn3O88705 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Hcn3O88705 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcn3O88705 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcn3O88705 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcn3O88705 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcn3O88705 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcn3O88705 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hcn3O88705 Notumos-201ENSMUST00000151998 2659 ntBASIC21.19■□□□□ 0.98
Hcn3O88705 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hcn3O88705 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hcn3O88705 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hcn3O88705 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms