Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,43
Lrp6O88572 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30,26■■■□□ 2,43
Lrp6O88572 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC30,25■■■□□ 2,43
Lrp6O88572 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Lrp6O88572 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30,25■■■□□ 2,43
Lrp6O88572 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Lrp6O88572 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Lrp6O88572 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC30,23■■■□□ 2,43
Lrp6O88572 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC30,23■■■□□ 2,43
Lrp6O88572 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Lrp6O88572 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Lrp6O88572 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC30,22■■■□□ 2,43
Lrp6O88572 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Lrp6O88572 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC30,19■■■□□ 2,42
Lrp6O88572 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC30,19■■■□□ 2,42
Lrp6O88572 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Lrp6O88572 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC30,18■■■□□ 2,42
Lrp6O88572 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30,17■■■□□ 2,42
Lrp6O88572 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC30,17■■■□□ 2,42
Lrp6O88572 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC30,16■■■□□ 2,42
Lrp6O88572 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Lrp6O88572 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Lrp6O88572 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Lrp6O88572 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Lrp6O88572 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC30,14■■■□□ 2,42
Lrp6O88572 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC30,14■■■□□ 2,42
Lrp6O88572 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC30,14■■■□□ 2,42
Lrp6O88572 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC30,14■■■□□ 2,41
Lrp6O88572 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,41
Lrp6O88572 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30,14■■■□□ 2,41
Lrp6O88572 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30,13■■■□□ 2,41
Lrp6O88572 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC30,11■■■□□ 2,41
Lrp6O88572 AC117769.4-201ENSMUST00000225679 685 ntBASIC30,11■■■□□ 2,41
Lrp6O88572 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC30,11■■■□□ 2,41
Lrp6O88572 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC30,11■■■□□ 2,41
Lrp6O88572 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,11■■■□□ 2,41
Lrp6O88572 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Lrp6O88572 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30,11■■■□□ 2,41
Lrp6O88572 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Lrp6O88572 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC30,11■■■□□ 2,41
Lrp6O88572 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Lrp6O88572 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Lrp6O88572 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Lrp6O88572 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Lrp6O88572 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC30,1■■■□□ 2,41
Lrp6O88572 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30,1■■■□□ 2,41
Lrp6O88572 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC30,09■■■□□ 2,41
Lrp6O88572 Gm7417-201ENSMUST00000192950 473 ntBASIC30,09■■■□□ 2,41
Lrp6O88572 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Lrp6O88572 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Lrp6O88572 Appbp2os-202ENSMUST00000206972 447 ntBASIC30,08■■■□□ 2,41
Lrp6O88572 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30,08■■■□□ 2,41
Lrp6O88572 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30,07■■■□□ 2,4
Lrp6O88572 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC30,07■■■□□ 2,4
Lrp6O88572 Gm22238-201ENSMUST00000175222 88 ntBASIC30,07■■■□□ 2,4
Lrp6O88572 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Lrp6O88572 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30,06■■■□□ 2,4
Lrp6O88572 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC30,06■■■□□ 2,4
Lrp6O88572 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30,06■■■□□ 2,4
Lrp6O88572 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30,05■■■□□ 2,4
Lrp6O88572 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC30,05■■■□□ 2,4
Lrp6O88572 Gm27454-201ENSMUST00000185090 204 ntBASIC30,05■■■□□ 2,4
Lrp6O88572 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Lrp6O88572 Gm43445-201ENSMUST00000198564 2091 ntBASIC30,04■■■□□ 2,4
Lrp6O88572 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30,03■■■□□ 2,4
Lrp6O88572 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC30,03■■■□□ 2,4
Lrp6O88572 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC30,03■■■□□ 2,4
Lrp6O88572 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC30,02■■■□□ 2,4
Lrp6O88572 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30,02■■■□□ 2,4
Lrp6O88572 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC30,01■■■□□ 2,39
Lrp6O88572 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30,01■■■□□ 2,39
Lrp6O88572 Gm29257-201ENSMUST00000186115 639 ntBASIC30,01■■■□□ 2,39
Lrp6O88572 Gm45417-201ENSMUST00000209533 758 ntBASIC30,01■■■□□ 2,39
Lrp6O88572 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC30,01■■■□□ 2,39
Lrp6O88572 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Lrp6O88572 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Lrp6O88572 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Lrp6O88572 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Lrp6O88572 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC30■■■□□ 2,39
Lrp6O88572 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30■■■□□ 2,39
Lrp6O88572 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2,39
Lrp6O88572 AC140930.3-201ENSMUST00000222935 274 ntBASIC30■■■□□ 2,39
Lrp6O88572 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Lrp6O88572 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC29,99■■■□□ 2,39
Lrp6O88572 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Lrp6O88572 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC29,99■■■□□ 2,39
Lrp6O88572 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC29,99■■■□□ 2,39
Lrp6O88572 Flvcr1-202ENSMUST00000191946 1216 ntBASIC29,98■■■□□ 2,39
Lrp6O88572 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Lrp6O88572 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Lrp6O88572 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,38
Lrp6O88572 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC29,95■■■□□ 2,38
Lrp6O88572 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC29,95■■■□□ 2,38
Lrp6O88572 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Lrp6O88572 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Lrp6O88572 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Lrp6O88572 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC29,93■■■□□ 2,38
Lrp6O88572 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC29,93■■■□□ 2,38
Lrp6O88572 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29,93■■■□□ 2,38
Lrp6O88572 Gm8495-201ENSMUST00000188740 694 ntBASIC29,93■■■□□ 2,38
Retrieved 100 of 76,532 protein–RNA pairs in 27,6 ms