Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.78■□□□□ 0.92
Tulp3O88413 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tulp3O88413 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Tulp3O88413 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Tulp3O88413 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Tulp3O88413 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tulp3O88413 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tulp3O88413 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tulp3O88413 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tulp3O88413 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.76■□□□□ 0.91
Tulp3O88413 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tulp3O88413 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tulp3O88413 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tulp3O88413 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.75■□□□□ 0.91
Tulp3O88413 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tulp3O88413 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tulp3O88413 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Tulp3O88413 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tulp3O88413 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tulp3O88413 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tulp3O88413 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tulp3O88413 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.74■□□□□ 0.91
Tulp3O88413 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tulp3O88413 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tulp3O88413 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tulp3O88413 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tulp3O88413 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tulp3O88413 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tulp3O88413 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tulp3O88413 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tulp3O88413 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tulp3O88413 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tulp3O88413 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tulp3O88413 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tulp3O88413 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tulp3O88413 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tulp3O88413 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tulp3O88413 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tulp3O88413 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tulp3O88413 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tulp3O88413 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tulp3O88413 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.7■□□□□ 0.9
Tulp3O88413 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tulp3O88413 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tulp3O88413 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tulp3O88413 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tulp3O88413 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tulp3O88413 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tulp3O88413 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tulp3O88413 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.67■□□□□ 0.9
Tulp3O88413 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tulp3O88413 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tulp3O88413 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tulp3O88413 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tulp3O88413 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tulp3O88413 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tulp3O88413 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tulp3O88413 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tulp3O88413 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tulp3O88413 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tulp3O88413 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tulp3O88413 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.64■□□□□ 0.89
Tulp3O88413 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tulp3O88413 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tulp3O88413 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.63■□□□□ 0.89
Tulp3O88413 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tulp3O88413 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.63■□□□□ 0.89
Tulp3O88413 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.63■□□□□ 0.89
Tulp3O88413 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.63■□□□□ 0.89
Tulp3O88413 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tulp3O88413 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tulp3O88413 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.62■□□□□ 0.89
Tulp3O88413 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tulp3O88413 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tulp3O88413 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tulp3O88413 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tulp3O88413 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tulp3O88413 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.61■□□□□ 0.89
Tulp3O88413 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.61■□□□□ 0.89
Tulp3O88413 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tulp3O88413 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tulp3O88413 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Tulp3O88413 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tulp3O88413 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.6■□□□□ 0.89
Tulp3O88413 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tulp3O88413 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tulp3O88413 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tulp3O88413 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.6■□□□□ 0.89
Tulp3O88413 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.6■□□□□ 0.89
Tulp3O88413 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.6■□□□□ 0.89
Tulp3O88413 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tulp3O88413 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms