Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tgfbr3O88393 Gm14117-201ENSMUST00000122417 843 ntBASIC21.45■■□□□ 1.02
Tgfbr3O88393 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tgfbr3O88393 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Tgfbr3O88393 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Tgfbr3O88393 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.44■■□□□ 1.02
Tgfbr3O88393 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tgfbr3O88393 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tgfbr3O88393 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tgfbr3O88393 Gm9959-201ENSMUST00000068277 390 ntBASIC21.4■■□□□ 1.02
Tgfbr3O88393 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tgfbr3O88393 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tgfbr3O88393 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tgfbr3O88393 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tgfbr3O88393 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.39■■□□□ 1.01
Tgfbr3O88393 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tgfbr3O88393 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tgfbr3O88393 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tgfbr3O88393 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.35■■□□□ 1.01
Tgfbr3O88393 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tgfbr3O88393 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tgfbr3O88393 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Tgfbr3O88393 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tgfbr3O88393 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tgfbr3O88393 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.33■■□□□ 1.01
Tgfbr3O88393 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.33■■□□□ 1.01
Tgfbr3O88393 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.33■■□□□ 1.01
Tgfbr3O88393 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tgfbr3O88393 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Tgfbr3O88393 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tgfbr3O88393 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.32■■□□□ 1
Tgfbr3O88393 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tgfbr3O88393 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.32■■□□□ 1
Tgfbr3O88393 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.32■■□□□ 1
Tgfbr3O88393 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tgfbr3O88393 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.31■■□□□ 1
Tgfbr3O88393 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tgfbr3O88393 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tgfbr3O88393 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tgfbr3O88393 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.3■■□□□ 1
Tgfbr3O88393 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.3■■□□□ 1
Tgfbr3O88393 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tgfbr3O88393 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.29■■□□□ 1
Tgfbr3O88393 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tgfbr3O88393 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.28■■□□□ 1
Tgfbr3O88393 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.28■■□□□ 1
Tgfbr3O88393 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tgfbr3O88393 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tgfbr3O88393 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Tgfbr3O88393 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Tgfbr3O88393 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.27■■□□□ 1
Tgfbr3O88393 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms