Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tgfbr3O88393 Gm14117-201ENSMUST00000122417 843 ntBASIC21.45■■□□□ 1.02
Tgfbr3O88393 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tgfbr3O88393 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Tgfbr3O88393 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Tgfbr3O88393 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.44■■□□□ 1.02
Tgfbr3O88393 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tgfbr3O88393 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tgfbr3O88393 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tgfbr3O88393 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tgfbr3O88393 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tgfbr3O88393 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tgfbr3O88393 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tgfbr3O88393 Gm9959-201ENSMUST00000068277 390 ntBASIC21.4■■□□□ 1.02
Tgfbr3O88393 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tgfbr3O88393 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tgfbr3O88393 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tgfbr3O88393 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tgfbr3O88393 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.39■■□□□ 1.01
Tgfbr3O88393 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tgfbr3O88393 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tgfbr3O88393 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tgfbr3O88393 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tgfbr3O88393 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tgfbr3O88393 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.35■■□□□ 1.01
Tgfbr3O88393 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tgfbr3O88393 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tgfbr3O88393 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Tgfbr3O88393 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tgfbr3O88393 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tgfbr3O88393 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.33■■□□□ 1.01
Tgfbr3O88393 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.33■■□□□ 1.01
Tgfbr3O88393 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.33■■□□□ 1.01
Tgfbr3O88393 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tgfbr3O88393 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Tgfbr3O88393 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tgfbr3O88393 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.32■■□□□ 1
Tgfbr3O88393 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tgfbr3O88393 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tgfbr3O88393 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.32■■□□□ 1
Tgfbr3O88393 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.32■■□□□ 1
Tgfbr3O88393 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tgfbr3O88393 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.31■■□□□ 1
Tgfbr3O88393 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tgfbr3O88393 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tgfbr3O88393 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tgfbr3O88393 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.3■■□□□ 1
Tgfbr3O88393 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.3■■□□□ 1
Tgfbr3O88393 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tgfbr3O88393 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.29■■□□□ 1
Tgfbr3O88393 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tgfbr3O88393 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tgfbr3O88393 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.28■■□□□ 1
Tgfbr3O88393 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.28■■□□□ 1
Tgfbr3O88393 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tgfbr3O88393 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tgfbr3O88393 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Tgfbr3O88393 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Tgfbr3O88393 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.27■■□□□ 1
Tgfbr3O88393 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms