Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm2O35900 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm2O35900 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm2O35900 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm2O35900 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm2O35900 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm2O35900 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm2O35900 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm2O35900 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm2O35900 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.94■□□□□ 0.78
Lsm2O35900 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm2O35900 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm2O35900 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm2O35900 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.93■□□□□ 0.78
Lsm2O35900 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.93■□□□□ 0.78
Lsm2O35900 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm2O35900 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lsm2O35900 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm2O35900 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Lsm2O35900 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lsm2O35900 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm2O35900 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm2O35900 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Lsm2O35900 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm2O35900 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm2O35900 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Lsm2O35900 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lsm2O35900 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lsm2O35900 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm2O35900 Gm37136-201ENSMUST00000194368 194 ntBASIC19.89■□□□□ 0.77
Lsm2O35900 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.89■□□□□ 0.77
Lsm2O35900 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm2O35900 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Lsm2O35900 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm2O35900 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
Lsm2O35900 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm2O35900 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm2O35900 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Lsm2O35900 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm2O35900 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm2O35900 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm2O35900 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm2O35900 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm2O35900 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm2O35900 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.86■□□□□ 0.77
Lsm2O35900 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm2O35900 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm2O35900 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm2O35900 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm2O35900 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm2O35900 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lsm2O35900 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm2O35900 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lsm2O35900 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm2O35900 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm2O35900 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Lsm2O35900 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm2O35900 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm2O35900 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Lsm2O35900 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm2O35900 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lsm2O35900 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Lsm2O35900 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Lsm2O35900 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Lsm2O35900 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm2O35900 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm2O35900 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm2O35900 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm2O35900 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm2O35900 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Lsm2O35900 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm2O35900 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm2O35900 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm2O35900 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm2O35900 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm2O35900 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm2O35900 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm2O35900 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm2O35900 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm2O35900 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm2O35900 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm2O35900 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.8■□□□□ 0.76
Lsm2O35900 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.8■□□□□ 0.76
Lsm2O35900 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm2O35900 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm2O35900 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Lsm2O35900 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm2O35900 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm2O35900 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm2O35900 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm2O35900 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.77■□□□□ 0.76
Lsm2O35900 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms