Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.27■□□□□ 0.84
Matn3O35701 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Matn3O35701 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.27■□□□□ 0.84
Matn3O35701 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Matn3O35701 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Matn3O35701 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Matn3O35701 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Matn3O35701 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Matn3O35701 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Matn3O35701 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Matn3O35701 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Matn3O35701 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Matn3O35701 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Matn3O35701 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.25■□□□□ 0.83
Matn3O35701 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Matn3O35701 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Matn3O35701 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Matn3O35701 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Matn3O35701 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Matn3O35701 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Matn3O35701 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.25■□□□□ 0.83
Matn3O35701 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Matn3O35701 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Matn3O35701 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn3O35701 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn3O35701 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn3O35701 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn3O35701 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Matn3O35701 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Matn3O35701 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Matn3O35701 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.23■□□□□ 0.83
Matn3O35701 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Matn3O35701 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Matn3O35701 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Matn3O35701 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Matn3O35701 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Matn3O35701 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Matn3O35701 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Matn3O35701 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Matn3O35701 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Matn3O35701 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Matn3O35701 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Matn3O35701 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.2■□□□□ 0.82
Matn3O35701 Notumos-201ENSMUST00000151998 2659 ntBASIC20.2■□□□□ 0.82
Matn3O35701 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Matn3O35701 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Matn3O35701 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Matn3O35701 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Matn3O35701 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Matn3O35701 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Matn3O35701 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Matn3O35701 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Matn3O35701 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Matn3O35701 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.18■□□□□ 0.82
Matn3O35701 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Matn3O35701 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Matn3O35701 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Matn3O35701 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Matn3O35701 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.17■□□□□ 0.82
Matn3O35701 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Matn3O35701 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Matn3O35701 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Matn3O35701 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Matn3O35701 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Matn3O35701 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Matn3O35701 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.15■□□□□ 0.82
Matn3O35701 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.15■□□□□ 0.82
Matn3O35701 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Matn3O35701 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Matn3O35701 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Matn3O35701 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Matn3O35701 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Matn3O35701 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Matn3O35701 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Matn3O35701 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Matn3O35701 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Matn3O35701 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Matn3O35701 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Matn3O35701 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Matn3O35701 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Matn3O35701 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.12■□□□□ 0.81
Matn3O35701 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Matn3O35701 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Matn3O35701 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Matn3O35701 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Matn3O35701 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Matn3O35701 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Matn3O35701 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Matn3O35701 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.1■□□□□ 0.81
Matn3O35701 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Matn3O35701 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Matn3O35701 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms