Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1O35604 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1O35604 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1O35604 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1O35604 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.7■■□□□ 1.06
Npc1O35604 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1O35604 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.7■■□□□ 1.06
Npc1O35604 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Npc1O35604 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1O35604 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Npc1O35604 Gm7332-201ENSMUST00000118351 454 ntBASIC21.69■■□□□ 1.06
Npc1O35604 Gm27502-201ENSMUST00000183495 199 ntBASIC21.69■■□□□ 1.06
Npc1O35604 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.69■■□□□ 1.06
Npc1O35604 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Npc1O35604 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1O35604 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1O35604 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1O35604 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1O35604 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1O35604 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1O35604 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1O35604 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1O35604 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1O35604 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.67■■□□□ 1.06
Npc1O35604 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1O35604 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Npc1O35604 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Npc1O35604 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Npc1O35604 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Npc1O35604 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.66■■□□□ 1.06
Npc1O35604 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Npc1O35604 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Npc1O35604 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1O35604 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1O35604 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Npc1O35604 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1O35604 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1O35604 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1O35604 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1O35604 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Npc1O35604 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.64■■□□□ 1.05
Npc1O35604 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Npc1O35604 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Npc1O35604 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Npc1O35604 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.63■■□□□ 1.05
Npc1O35604 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1O35604 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.62■■□□□ 1.05
Npc1O35604 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.62■■□□□ 1.05
Npc1O35604 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Npc1O35604 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Npc1O35604 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1O35604 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1O35604 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.6■■□□□ 1.05
Npc1O35604 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.6■■□□□ 1.05
Npc1O35604 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Npc1O35604 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Npc1O35604 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1O35604 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Npc1O35604 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.59■■□□□ 1.05
Npc1O35604 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.59■■□□□ 1.05
Npc1O35604 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.59■■□□□ 1.05
Npc1O35604 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1O35604 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1O35604 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1O35604 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Npc1O35604 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Npc1O35604 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Npc1O35604 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Npc1O35604 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.56■■□□□ 1.04
Npc1O35604 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.56■■□□□ 1.04
Npc1O35604 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.56■■□□□ 1.04
Npc1O35604 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1O35604 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Npc1O35604 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Npc1O35604 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Npc1O35604 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Npc1O35604 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.54■■□□□ 1.04
Npc1O35604 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Npc1O35604 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Npc1O35604 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.54■■□□□ 1.04
Npc1O35604 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Npc1O35604 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Npc1O35604 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Npc1O35604 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1O35604 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1O35604 Gm10420-201ENSMUST00000121713 882 ntBASIC21.52■■□□□ 1.04
Npc1O35604 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1O35604 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Npc1O35604 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1O35604 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1O35604 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Npc1O35604 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms