Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clk3O35492 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clk3O35492 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
Clk3O35492 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clk3O35492 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.07■□□□□ 0.96
Clk3O35492 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk3O35492 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clk3O35492 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk3O35492 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Clk3O35492 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clk3O35492 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk3O35492 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.06■□□□□ 0.96
Clk3O35492 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk3O35492 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk3O35492 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk3O35492 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk3O35492 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Clk3O35492 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.04■□□□□ 0.96
Clk3O35492 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Clk3O35492 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk3O35492 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clk3O35492 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clk3O35492 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk3O35492 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk3O35492 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.02■□□□□ 0.96
Clk3O35492 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clk3O35492 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk3O35492 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk3O35492 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clk3O35492 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk3O35492 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk3O35492 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Clk3O35492 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk3O35492 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clk3O35492 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Clk3O35492 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk3O35492 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clk3O35492 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk3O35492 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk3O35492 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk3O35492 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk3O35492 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk3O35492 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.98■□□□□ 0.95
Clk3O35492 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk3O35492 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Clk3O35492 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.98■□□□□ 0.95
Clk3O35492 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk3O35492 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk3O35492 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk3O35492 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clk3O35492 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.97■□□□□ 0.95
Clk3O35492 Mir3960-201ENSMUST00000198213 73 ntBASIC20.97■□□□□ 0.95
Clk3O35492 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clk3O35492 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clk3O35492 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.96■□□□□ 0.95
Clk3O35492 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clk3O35492 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clk3O35492 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clk3O35492 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clk3O35492 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Clk3O35492 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.96■□□□□ 0.95
Clk3O35492 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clk3O35492 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clk3O35492 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clk3O35492 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.95■□□□□ 0.94
Clk3O35492 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clk3O35492 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clk3O35492 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clk3O35492 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clk3O35492 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Clk3O35492 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk3O35492 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk3O35492 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk3O35492 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk3O35492 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clk3O35492 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clk3O35492 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clk3O35492 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clk3O35492 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.93■□□□□ 0.94
Clk3O35492 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.93■□□□□ 0.94
Clk3O35492 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clk3O35492 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clk3O35492 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clk3O35492 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.92■□□□□ 0.94
Clk3O35492 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clk3O35492 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clk3O35492 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clk3O35492 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clk3O35492 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clk3O35492 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.9■□□□□ 0.94
Clk3O35492 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clk3O35492 Gm6311-201ENSMUST00000073790 878 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms