Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
AlyrefO08583 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
AlyrefO08583 Gm18284-201ENSMUST00000172604 624 ntBASIC22.67■■□□□ 1.22
AlyrefO08583 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.67■■□□□ 1.22
AlyrefO08583 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
AlyrefO08583 Terc-201ENSMUST00000082862 423 ntBASIC22.67■■□□□ 1.22
AlyrefO08583 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
AlyrefO08583 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
AlyrefO08583 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
AlyrefO08583 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
AlyrefO08583 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
AlyrefO08583 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.66■■□□□ 1.22
AlyrefO08583 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
AlyrefO08583 Gm12821-201ENSMUST00000120022 600 ntBASIC22.65■■□□□ 1.22
AlyrefO08583 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
AlyrefO08583 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
AlyrefO08583 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.64■■□□□ 1.21
AlyrefO08583 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
AlyrefO08583 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
AlyrefO08583 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
AlyrefO08583 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.63■■□□□ 1.21
AlyrefO08583 Gm7417-201ENSMUST00000192950 473 ntBASIC22.63■■□□□ 1.21
AlyrefO08583 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
AlyrefO08583 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
AlyrefO08583 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
AlyrefO08583 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
AlyrefO08583 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
AlyrefO08583 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
AlyrefO08583 Gm44428-201ENSMUST00000204474 874 ntBASIC22.61■■□□□ 1.21
AlyrefO08583 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.61■■□□□ 1.21
AlyrefO08583 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
AlyrefO08583 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
AlyrefO08583 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
AlyrefO08583 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.6■■□□□ 1.21
AlyrefO08583 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
AlyrefO08583 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
AlyrefO08583 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
AlyrefO08583 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
AlyrefO08583 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
AlyrefO08583 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
AlyrefO08583 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
AlyrefO08583 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
AlyrefO08583 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
AlyrefO08583 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
AlyrefO08583 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
AlyrefO08583 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
AlyrefO08583 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
AlyrefO08583 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
AlyrefO08583 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
AlyrefO08583 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.57■■□□□ 1.2
AlyrefO08583 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.57■■□□□ 1.2
AlyrefO08583 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.57■■□□□ 1.2
AlyrefO08583 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
AlyrefO08583 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.56■■□□□ 1.2
AlyrefO08583 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.56■■□□□ 1.2
AlyrefO08583 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.56■■□□□ 1.2
AlyrefO08583 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
AlyrefO08583 Gm27454-201ENSMUST00000185090 204 ntBASIC22.55■■□□□ 1.2
AlyrefO08583 Gm45417-201ENSMUST00000209533 758 ntBASIC22.55■■□□□ 1.2
AlyrefO08583 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
AlyrefO08583 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AlyrefO08583 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AlyrefO08583 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
AlyrefO08583 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
AlyrefO08583 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
AlyrefO08583 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
AlyrefO08583 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.53■■□□□ 1.2
AlyrefO08583 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
AlyrefO08583 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
AlyrefO08583 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
AlyrefO08583 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
AlyrefO08583 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
AlyrefO08583 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
AlyrefO08583 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
AlyrefO08583 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
AlyrefO08583 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
AlyrefO08583 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
AlyrefO08583 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.5■■□□□ 1.19
AlyrefO08583 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
AlyrefO08583 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
AlyrefO08583 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
AlyrefO08583 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
AlyrefO08583 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
AlyrefO08583 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
AlyrefO08583 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
AlyrefO08583 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.48■■□□□ 1.19
AlyrefO08583 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
AlyrefO08583 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
AlyrefO08583 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
AlyrefO08583 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
AlyrefO08583 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
AlyrefO08583 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
AlyrefO08583 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
AlyrefO08583 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
AlyrefO08583 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
AlyrefO08583 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
AlyrefO08583 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
AlyrefO08583 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
AlyrefO08583 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.45■■□□□ 1.18
AlyrefO08583 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms