Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gm3727J3QM54 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gm3727J3QM54 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3727J3QM54 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3727J3QM54 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm3727J3QM54 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3727J3QM54 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3727J3QM54 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3727J3QM54 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19■□□□□ 0.63
Gm3727J3QM54 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm3727J3QM54 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gm3727J3QM54 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3727J3QM54 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm3727J3QM54 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3727J3QM54 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.98■□□□□ 0.63
Gm3727J3QM54 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gm3727J3QM54 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.98■□□□□ 0.63
Gm3727J3QM54 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gm3727J3QM54 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3727J3QM54 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm3727J3QM54 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3727J3QM54 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3727J3QM54 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.97■□□□□ 0.63
Gm3727J3QM54 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3727J3QM54 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Gm3727J3QM54 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3727J3QM54 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Gm3727J3QM54 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm3727J3QM54 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.97■□□□□ 0.63
Gm3727J3QM54 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3727J3QM54 Gm30023-201ENSMUST00000197970 889 ntBASIC18.96■□□□□ 0.63
Gm3727J3QM54 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3727J3QM54 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3727J3QM54 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3727J3QM54 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gm3727J3QM54 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3727J3QM54 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Gm3727J3QM54 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm3727J3QM54 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3727J3QM54 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3727J3QM54 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3727J3QM54 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3727J3QM54 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3727J3QM54 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3727J3QM54 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3727J3QM54 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.94■□□□□ 0.62
Gm3727J3QM54 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Gm3727J3QM54 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Gm3727J3QM54 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3727J3QM54 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3727J3QM54 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.93■□□□□ 0.62
Gm3727J3QM54 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3727J3QM54 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3727J3QM54 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3727J3QM54 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Gm3727J3QM54 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3727J3QM54 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3727J3QM54 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3727J3QM54 Gm8109-201ENSMUST00000194076 746 ntBASIC18.91■□□□□ 0.62
Gm3727J3QM54 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3727J3QM54 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3727J3QM54 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3727J3QM54 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3727J3QM54 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3727J3QM54 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3727J3QM54 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3727J3QM54 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3727J3QM54 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3727J3QM54 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.89■□□□□ 0.62
Gm3727J3QM54 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3727J3QM54 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gm3727J3QM54 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3727J3QM54 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3727J3QM54 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Gm3727J3QM54 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.88■□□□□ 0.61
Gm3727J3QM54 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3727J3QM54 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3727J3QM54 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm3727J3QM54 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3727J3QM54 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3727J3QM54 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Gm3727J3QM54 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Gm3727J3QM54 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3727J3QM54 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3727J3QM54 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3727J3QM54 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3727J3QM54 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.86■□□□□ 0.61
Gm3727J3QM54 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.86■□□□□ 0.61
Gm3727J3QM54 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3727J3QM54 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3727J3QM54 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3727J3QM54 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3727J3QM54 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3727J3QM54 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gm3727J3QM54 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gm3727J3QM54 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3727J3QM54 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3727J3QM54 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Gm3727J3QM54 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gm3727J3QM54 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms