Protein–RNA interactions for Protein: G5E870

Trip12, E3 ubiquitin-protein ligase TRIP12, mousemouse

Known RBP Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trip12G5E870 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trip12G5E870 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trip12G5E870 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trip12G5E870 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trip12G5E870 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trip12G5E870 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trip12G5E870 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.69■□□□□ 0.9
Trip12G5E870 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trip12G5E870 Gm9959-201ENSMUST00000068277 390 ntBASIC20.69■□□□□ 0.9
Trip12G5E870 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trip12G5E870 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trip12G5E870 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trip12G5E870 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trip12G5E870 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trip12G5E870 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trip12G5E870 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trip12G5E870 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trip12G5E870 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trip12G5E870 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trip12G5E870 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.66■□□□□ 0.9
Trip12G5E870 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trip12G5E870 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.66■□□□□ 0.9
Trip12G5E870 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trip12G5E870 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trip12G5E870 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trip12G5E870 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trip12G5E870 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trip12G5E870 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.66■□□□□ 0.9
Trip12G5E870 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trip12G5E870 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.65■□□□□ 0.9
Trip12G5E870 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.65■□□□□ 0.9
Trip12G5E870 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trip12G5E870 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trip12G5E870 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.65■□□□□ 0.9
Trip12G5E870 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trip12G5E870 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trip12G5E870 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trip12G5E870 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trip12G5E870 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trip12G5E870 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trip12G5E870 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Trip12G5E870 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trip12G5E870 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trip12G5E870 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trip12G5E870 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trip12G5E870 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trip12G5E870 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trip12G5E870 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trip12G5E870 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trip12G5E870 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Trip12G5E870 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.61■□□□□ 0.89
Trip12G5E870 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.61■□□□□ 0.89
Trip12G5E870 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.61■□□□□ 0.89
Trip12G5E870 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trip12G5E870 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.61■□□□□ 0.89
Trip12G5E870 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trip12G5E870 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trip12G5E870 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.6■□□□□ 0.89
Trip12G5E870 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trip12G5E870 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Trip12G5E870 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trip12G5E870 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trip12G5E870 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trip12G5E870 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trip12G5E870 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trip12G5E870 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trip12G5E870 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trip12G5E870 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trip12G5E870 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.58■□□□□ 0.89
Trip12G5E870 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trip12G5E870 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trip12G5E870 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.58■□□□□ 0.88
Trip12G5E870 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trip12G5E870 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trip12G5E870 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.57■□□□□ 0.88
Trip12G5E870 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trip12G5E870 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.57■□□□□ 0.88
Trip12G5E870 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trip12G5E870 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.57■□□□□ 0.88
Trip12G5E870 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trip12G5E870 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trip12G5E870 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trip12G5E870 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.56■□□□□ 0.88
Trip12G5E870 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trip12G5E870 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trip12G5E870 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
Trip12G5E870 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.56■□□□□ 0.88
Trip12G5E870 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Trip12G5E870 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trip12G5E870 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.55■□□□□ 0.88
Trip12G5E870 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trip12G5E870 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trip12G5E870 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trip12G5E870 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trip12G5E870 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trip12G5E870 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.54■□□□□ 0.88
Trip12G5E870 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trip12G5E870 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trip12G5E870 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trip12G5E870 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms