Protein–RNA interactions for Protein: F6VCN9

Gm5861, Predicted gene 5861 (Fragment), mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5861F6VCN9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Gm5861F6VCN9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5861F6VCN9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5861F6VCN9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm5861F6VCN9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5861F6VCN9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm5861F6VCN9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5861F6VCN9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.28■■□□□ 1
Gm5861F6VCN9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5861F6VCN9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5861F6VCN9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Gm5861F6VCN9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5861F6VCN9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5861F6VCN9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.27■■□□□ 1
Gm5861F6VCN9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm5861F6VCN9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
Gm5861F6VCN9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.27■■□□□ 1
Gm5861F6VCN9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm5861F6VCN9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5861F6VCN9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.26■□□□□ 0.99
Gm5861F6VCN9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.26■□□□□ 0.99
Gm5861F6VCN9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5861F6VCN9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Gm5861F6VCN9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5861F6VCN9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5861F6VCN9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5861F6VCN9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5861F6VCN9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5861F6VCN9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5861F6VCN9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5861F6VCN9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Gm5861F6VCN9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Gm5861F6VCN9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5861F6VCN9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5861F6VCN9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5861F6VCN9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gm5861F6VCN9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5861F6VCN9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm5861F6VCN9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.21■□□□□ 0.99
Gm5861F6VCN9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gm5861F6VCN9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.99
Gm5861F6VCN9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.2■□□□□ 0.98
Gm5861F6VCN9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gm5861F6VCN9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5861F6VCN9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5861F6VCN9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.19■□□□□ 0.98
Gm5861F6VCN9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5861F6VCN9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5861F6VCN9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5861F6VCN9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5861F6VCN9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5861F6VCN9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5861F6VCN9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5861F6VCN9 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.17■□□□□ 0.98
Gm5861F6VCN9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5861F6VCN9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm5861F6VCN9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5861F6VCN9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm5861F6VCN9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Gm5861F6VCN9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5861F6VCN9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Gm5861F6VCN9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5861F6VCN9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gm5861F6VCN9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5861F6VCN9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm5861F6VCN9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Gm5861F6VCN9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm5861F6VCN9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm5861F6VCN9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm5861F6VCN9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5861F6VCN9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.14■□□□□ 0.97
Gm5861F6VCN9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.14■□□□□ 0.97
Gm5861F6VCN9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm5861F6VCN9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5861F6VCN9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5861F6VCN9 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.13■□□□□ 0.97
Gm5861F6VCN9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.13■□□□□ 0.97
Gm5861F6VCN9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5861F6VCN9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5861F6VCN9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5861F6VCN9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5861F6VCN9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5861F6VCN9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms